PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004509788.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family AP2
Protein Properties Length: 306aa    MW: 34361.4 Da    PI: 9.8769
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004509788.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.22.3e-1460119155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpse..ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s y+GV+++ ++gr++A+++d s    g  ++ ++++lg ++ +e+Aa+a++ a++k +g
  XP_004509788.1  60 SIYRGVTRHIWTGRYEAHLWDNSYrrEGrvRKgRQVYLGGYDKEEKAARAYDLAALKHWG 119
                     57*******************655454487447***********************9887 PP
2AP251.32.8e-16162214156
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     s y+GV++++++grW A+I  +     +k   lg+f t+eeAa+a++ a+ k++ge
  XP_004509788.1 162 SIYRGVTRHHQQGRWQARIGRVAG---NKDLFLGTFATEEEAAEAYDIAAIKYRGE 214
                     57****************988532...5**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541717.19E-1760129IPR016177DNA-binding domain
CDDcd000181.96E-2160129No hitNo description
PfamPF008475.5E-1160119IPR001471AP2/ERF domain
PROSITE profilePS5103218.59761127IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.1E-1561128IPR001471AP2/ERF domain
SMARTSM003801.7E-2761133IPR001471AP2/ERF domain
PRINTSPR003671.3E-66273IPR001471AP2/ERF domain
SuperFamilySSF541712.94E-18162223IPR016177DNA-binding domain
PfamPF008477.7E-10162214IPR001471AP2/ERF domain
PROSITE profilePS5103218.597163221IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-18163222IPR001471AP2/ERF domain
SMARTSM003803.7E-29163227IPR001471AP2/ERF domain
PRINTSPR003671.3E-6203223IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MDSSLSPNQK LFTFPKIEDF SLNNPNSVSV YDIESIPLSN DKAIVAVDSD TSKSTSQRTS  60
IYRGVTRHIW TGRYEAHLWD NSYRREGRVR KGRQVYLGGY DKEEKAARAY DLAALKHWGP  120
TATINFPVSQ YAKELEEMKH VGKQEFIASL RRKSSGFSRG ASIYRGVTRH HQQGRWQARI  180
GRVAGNKDLF LGTFATEEEA AEAYDIAAIK YRGEKAVTNF DVSRYDTVAI LKTSLPVGGA  240
AKRMKPSQET EKKSRMSTNA TNISTPYAES DTAESVATTT NEGRVLLTTM PTAAEFFLLW  300
PHHHSH
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that promotes cell proliferation, differentiation and morphogenesis, especially during embryogenesis. {ECO:0000269|PubMed:12172019}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004509788.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004509788.10.0AP2-like ethylene-responsive transcription factor AIL7
SwissprotQ8LSN21e-111BBM2_BRANA; AP2-like ethylene-responsive transcription factor BBM2
TrEMBLA0A1S2YTR90.0A0A1S2YTR9_CICAR; AP2-like ethylene-responsive transcription factor AIL7
STRINGXP_004509788.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF48103149
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10510.11e-107AINTEGUMENTA-like 6