PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004509761.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 433aa    MW: 46917.4 Da    PI: 6.5112
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004509761.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.89.1e-09285333355
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      +h+ +Er RR++i +++  L++l+P +    sk   Ka +L + ++Y++sLq
  XP_004509761.1 285 NSHSLAERVRREKISERMKFLQDLVPGC----SKVTGKALMLDEIINYVQSLQ 333
                     58*************************9....556*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.57E-16280351IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.57E-10280337No hitNo description
PROSITE profilePS5088815.345282332IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.6E-16283348IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.6E-6285333IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-8288338IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    Send to blast
MSEGEKFEVD RKEGMALDWR FLSANLANSS DGLVSMENSM NIIGSSSCSN SMVDSYGPNF  60
LDLLPNSENL GFCDVNAHQS NVSSSITDGI RKDGFSFVRV GHDDNRTLGM SWNLNLASSM  120
MMKTDGILPN GSLSQFPTDS GFIDAVRMSC FSAAGGFGDT MNSCGIPQSM ALQALGGCSN  180
EGDRGESSGD DGVGSHHDSQ MLDCTSEEPS IKGLNPKKRK RKGQDNDSDK ATRKGNCESR  240
QKGEQQPTST TKAASKKNAK QGSQASVPTD EGYVHVRARR GQATNSHSLA ERVRREKISE  300
RMKFLQDLVP GCSKVTGKAL MLDEIINYVQ SLQQQAEFLS MKLASVNPHV DFNLEELLPK  360
DVLQHRPGPS SVLGFLTEMP VTFPSSLHSP QPGLTRLTLP NMANSSNILE RTVQQQGGFK  420
EANQVNPLQG AKH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1216221KKRKRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004509761.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004509761.10.0transcription factor bHLH49-like
RefseqXP_004509763.10.0transcription factor bHLH49-like
RefseqXP_012573836.10.0transcription factor bHLH49-like
TrEMBLA0A1S2YTQ30.0A0A1S2YTQ3_CICAR; transcription factor bHLH49-like
STRINGXP_004509761.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF72493248
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.31e-71bHLH family protein