PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004509751.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family G2-like
Protein Properties Length: 363aa    MW: 40497.7 Da    PI: 7.2335
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004509751.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.84.4e-32183236255
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     pr+rWt +LH+rFv+av+ LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  XP_004509751.1 183 PRMRWTATLHSRFVHAVQLLGGHERATPKSVLELMDVKDLTLSHVKSHLQMYRT 236
                     9****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.05E-15180236IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.5E-28181236IPR009057Homeodomain-like
TIGRFAMsTIGR015575.4E-24183237IPR006447Myb domain, plants
PfamPF002492.6E-7184235IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    Send to blast
MELFPAQPDL SLQISLTNNN ETTSSSSWRR NTNEEEEEEE EIDLGFWKRA LDSNSRSNTF  60
DLSLSNPLSA SSSSSSSSNP NLITHPFHNN NNSNNPFHQS HYFQNQNNNK KSLSEELGFL  120
KPIRGIPVYH QKASPNNPFA LFSSQKPFDV VASSSSSTTF HSQSLMRSKF LPRFPSKRSM  180
RAPRMRWTAT LHSRFVHAVQ LLGGHERATP KSVLELMDVK DLTLSHVKSH LQMYRTGKIT  240
DRAGASSGQS DINYDNGSSG DTSEDFIFDI NSSTRSNDPP IKLPTEITNH DKENCGLWSS  300
SSEPWLHAKP NLHPLPIIPS LQGMDPKCLS NERNSDGSCS SNISGTSLKK TNLDLEFTLG  360
RSL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A7e-18184238458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B7e-18184238458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A7e-18184238458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C7e-18184238458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D7e-18184238458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F7e-18184238458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H7e-18184238458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J7e-18184238458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that regulates lateral organ polarity. Promotes abaxial cell fate during lateral organd formation. Functions with KAN1 in the specification of polarity of the ovule outer integument. {ECO:0000269|PubMed:11525739, ECO:0000269|PubMed:15286295, ECO:0000269|PubMed:16623911, ECO:0000269|PubMed:17307928}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004509751.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004509751.10.0probable transcription factor KAN2
SwissprotQ9C6162e-81KAN2_ARATH; Probable transcription factor KAN2
TrEMBLA0A1S2YTP50.0A0A1S2YTP5_CICAR; probable transcription factor KAN2
STRINGXP_004509751.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF59683452
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32240.19e-64G2-like family protein
Publications ? help Back to Top
  1. Machida C,Nakagawa A,Kojima S,Takahashi H,Machida Y
    The complex of ASYMMETRIC LEAVES (AS) proteins plays a central role in antagonistic interactions of genes for leaf polarity specification in Arabidopsis.
    Wiley Interdiscip Rev Dev Biol, 2015 Nov-Dec. 4(6): p. 655-71
    [PMID:26108442]