PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004509291.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family C2H2
Protein Properties Length: 1449aa    MW: 164359 Da    PI: 6.316
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004509291.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.20.00056799822123
                     EEETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                     y C +C  sF +k +L++H +  H
  XP_004509291.1 799 YACAICLDSFANKKLLESHVKErH 822
                     89******************9988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003556.2765788IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280767788IPR007087Zinc finger, C2H2
SMARTSM003550.16799822IPR015880Zinc finger, C2H2-like
PROSITE profilePS501578.974799827IPR007087Zinc finger, C2H2
PROSITE patternPS000280801822IPR007087Zinc finger, C2H2
SMARTSM0035516833856IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280835856IPR007087Zinc finger, C2H2
SMARTSM003550.72906929IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.245906934IPR007087Zinc finger, C2H2
PROSITE patternPS000280907929IPR007087Zinc finger, C2H2
SuperFamilySSF821992.75E-7111481439No hitNo description
Gene3DG3DSA:2.170.270.105.0E-7511501448No hitNo description
SMARTSM004687.1E-411561278IPR007728Pre-SET domain
PfamPF050332.9E-1111601286IPR007728Pre-SET domain
PROSITE profilePS508678.88512151291IPR007728Pre-SET domain
PROSITE profilePS5028017.23312941426IPR001214SET domain
SMARTSM003171.9E-3312941432IPR001214SET domain
PfamPF008569.2E-1813051425IPR001214SET domain
PROSITE profilePS508689.44514331449IPR003616Post-SET domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0034968Biological Processhistone lysine methylation
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
GO:0018024Molecular Functionhistone-lysine N-methyltransferase activity
Sequence ? help Back to Top
Protein Sequence    Length: 1449 aa     Download sequence    Send to blast
MVLLPYSGVE NAEESDCSNK PNQGTAYAYS GELICVQNKE YLVFEDDKMN EPGLTSENTP  60
STVEMIESES PNNNRVSFFK WLAKDEPTAV WFKWRGEWQA GIKCGRADWS LSALKSKPSS  120
DQMKYVLIFS LDTRDLSWAD ILNVESIDKF PQPIPYKTHE EGLQMVKDLT IARRFQMQKL  180
AVDMLSIVDQ FHSNALVETA RDVMVWKQFA MEASHCHGYS DLGRMLQSLQ NSILQNYIKA  240
DWILYSYKSW AERCKNANSA ILVELLKEEL YVSILWNDVN NLWDAALAQP KLGSEWKAWK  300
NDVMKWFSIF PSFSRNKDMM QQDASNGLHQ VSLQVCRKRP KLTVRRADTL PSMVDSLSAL  360
AAVNSELEDI VEVPVLTDIP GNLNTHWKEI VVEPTYSEIM LSNGTESRPM EEIPVQNVVE  420
SGTENQQCQA HIEVTGRPDV RPVVGGDEMA VPKFVESGNK NAQCQAYIEA KGRQCVRPVV  480
GGDIYCCVHF SERVLGGSRK TERPVTIVTP ICSGTTIAGT RCKHHSLPGF LFCKKHQNET  540
SNSSHNTLKR KIDESCSGSN GLICKDNVLV NDGSPLQIDS VSDDDDSFSG RNNLGELLML  600
SGNDYHVMEA LQCIGSPHYG NGNEDSCFEA PKWYSLYCEK HLPNWLKNAT NGKSRIISNE  660
VFTDNLTGCS SLEQKVHLHK ACMIFYKLFR SILSQKNLES NEARFQWALA EASKETSVGD  720
FFYKLVHSEK ERIKLTWGFD GDVNATSLME GLSRLRSASM NDNAIKCKIC FAEFSDDQTL  780
CNHWMENHKK EAEWLFRGYA CAICLDSFAN KKLLESHVKE RHRVEFVEQC LLFLCIPCGG  840
HFGNMEELLL HVVSAHPVEF KPSKAHPSPE RQTLSTSDDS LELIEQGNEA PLDNNNSENQ  900
DSLRKFCCRF CGMKFNLLPD LGRHHQATHM DRNLASRRLA RREVRHYAHR LKSGRISHPK  960
FKKGLSEASY RGIRNRANAN LKRKNKETRL LEVGETSTQP HVNETENIGH PEDCKYSLIV  1020
KILLSEIHKI KPRPNNIDIL SIARSSCCKV NLKASLEENF GTFPESFYAR AAKLCSENGI  1080
QVNWHQKEFI CLRGCNASND ENLIPRLALP SNDQMMQNSV NISDIAINEL EKNEFHCIVN  1140
MHTLKFGSLQ NDIVLCDDIS FGKESTPVIC VLDQEILNSL FEQDVSLSMP WESFTYVTKP  1200
MLDRSLTLYS QSLHLRCSCS SSTCCHETCD HIYLFDNDYD DAKDIFGKPM RGRFPYNENG  1260
RIILEEGYLV YECNHMCKCD KTCPNRILQN GVQVKLEVFK TEKKGWAVRA GEAIPHGTFV  1320
CEFIGEVIGE QEALKRCERY GKEHCSYLYD IDAHVNDIGR LIGEQARYVI DSTTYGNVSR  1380
FINNSCSPNL VNYQVLVESM DCERSHIGLY ASRDIALGEE LTYNYHYELV PGEGSPCLCG  1440
SSKCRGRLY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2igq_A8e-421158144532283euchromatic histone methyltransferase 1
2igq_B8e-421158144532283euchromatic histone methyltransferase 1
2rfi_A8e-421158144532283Histone-lysine N-methyltransferase, H3 lysine-9 specific 5
2rfi_B8e-421158144532283Histone-lysine N-methyltransferase, H3 lysine-9 specific 5
3mo0_A8e-421158144532283Histone-lysine N-methyltransferase, H3 lysine-9 specific 5
3mo0_B8e-421158144532283Histone-lysine N-methyltransferase, H3 lysine-9 specific 5
3mo2_A8e-421158144532283Histone-lysine N-methyltransferase, H3 lysine-9 specific 5
3mo2_B8e-421158144532283Histone-lysine N-methyltransferase, H3 lysine-9 specific 5
3mo2_C8e-421158144532283Histone-lysine N-methyltransferase, H3 lysine-9 specific 5
3mo2_D8e-421158144532283Histone-lysine N-methyltransferase, H3 lysine-9 specific 5
3mo5_A8e-421158144532283Histone-lysine N-methyltransferase, H3 lysine-9 specific 5
3mo5_B8e-421158144532283Histone-lysine N-methyltransferase, H3 lysine-9 specific 5
3mo5_C8e-421158144532283Histone-lysine N-methyltransferase, H3 lysine-9 specific 5
3mo5_D8e-421158144532283Histone-lysine N-methyltransferase, H3 lysine-9 specific 5
3sw9_A8e-421158144532283Histone-lysine N-methyltransferase EHMT1
3sw9_B8e-421158144532283Histone-lysine N-methyltransferase EHMT1
3swc_A8e-421158144532283Histone-lysine N-methyltransferase EHMT1
3swc_B8e-421158144532283Histone-lysine N-methyltransferase EHMT1
5v9j_A1e-411154144530285Histone-lysine N-methyltransferase EHMT1
5v9j_B1e-411154144530285Histone-lysine N-methyltransferase EHMT1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004509291.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004509291.10.0histone-lysine N-methyltransferase SUVR5-like
TrEMBLA0A1S2YSN90.0A0A1S2YSN9_CICAR; histone-lysine N-methyltransferase SUVR5-like
STRINGXP_004509291.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF501922