PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004509052.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family AP2
Protein Properties Length: 654aa    MW: 73315.9 Da    PI: 6.8269
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004509052.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.62.3e-16311370155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV++++++gr++A+++d  ++  g  ++ ++++lg ++ +e+Aa+a+++a++k++g
  XP_004509052.1 311 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqsRKgRQVYLGGYDMEEKAARAYDQAALKYWG 370
                     78*******************988886678446*************************98 PP
2AP246.49.6e-15415464355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  XP_004509052.1 415 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 464
                     9***************988532...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000188.78E-22311378No hitNo description
SuperFamilySSF541711.37E-16311380IPR016177DNA-binding domain
PfamPF008476.8E-13311370IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-16312379IPR001471AP2/ERF domain
PROSITE profilePS5103218.913312378IPR001471AP2/ERF domain
SMARTSM003802.1E-29312384IPR001471AP2/ERF domain
PRINTSPR003672.4E-6313324IPR001471AP2/ERF domain
CDDcd000185.83E-25413474No hitNo description
SuperFamilySSF541711.5E-17413473IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.3E-18414472IPR001471AP2/ERF domain
SMARTSM003802.4E-33414478IPR001471AP2/ERF domain
PROSITE profilePS5103219.19414472IPR001471AP2/ERF domain
PfamPF008471.7E-9415464IPR001471AP2/ERF domain
PRINTSPR003672.4E-6454474IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 654 aa     Download sequence    Send to blast
MKRMENDDDG VDINNENNNW LGFSLSPQMN IGVSSHTHQS NASSSAASEV VPTSFYHSGS  60
LSNYGFSYGL EAENVGLYSV FPIMPLKSDG SLYGMEPLSR SQTQVMATNS APKLENFLDS  120
EAMGTPHYAC SSVITETMPL SLDSMFQNQV QHMNNQQQQF HNQNLSSYYS TLRNNDLLLE  180
GSKQSQTSSE SHHVSNMVED NGLTSLKSWV LRNFPTSHTN ESKMIVPVVE ENDQGECGSI  240
GSMAYGDLHS LSLSMSPSSQ SSCVTSSQRM SSPAVIDNSA VVDTKKRGHE KFEQKQIVHR  300
KSIDTFGQRT SQYRGVTRHR WTGRYEAHLW DNSCKKEGQS RKGRQVYLGG YDMEEKAARA  360
YDQAALKYWG PSTHINFPLE NYQNQLEEMK NMTRQEYVAH LRRKSSGFSR GASMYRGVTR  420
HHQHGRWQAR IGRVAGNKDL YLGTFSTQEE AAEAYDIAAI KFRGANAVTN FDITKYDVEK  480
IMSSSNLLSI ELARKNKEVD IGTTQYIDHN KSHSSSYDNT QETILMQKNM VLYQSSSQQQ  540
HEQNPPRTET EKTHQSFSTV SLDNMFHQEV VVEEPSKTRN RVSNPSSLAT SLNSSREGSP  600
DRTSLQNLSE SMPSKLLVSA PNSSNVNSWD PSTHLRPALS NLPQIPVFAA WTDA
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004509052.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004509052.10.0AP2-like ethylene-responsive transcription factor ANT
TrEMBLA0A1S2YS540.0A0A1S2YS54_CICAR; AP2-like ethylene-responsive transcription factor ANT
STRINGXP_004509052.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF91634114
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.11e-128AP2 family protein