PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_004508743.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family | Nin-like | ||||||||
Protein Properties | Length: 259aa MW: 30515.5 Da PI: 4.6817 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 84.5 | 9.8e-27 | 137 | 187 | 2 | 52 |
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 k++s + +s+yF++pi++AA+eL+v+lT LK++CR++GI+RWPhRk+ sl XP_004508743.1 137 AKNLSRKIISQYFYMPITQAARELNVGLTFLKKRCRELGIRRWPHRKLMSL 187 689*********************************************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 17.518 | 123 | 207 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 2.1E-21 | 139 | 187 | IPR003035 | RWP-RK domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0051302 | Biological Process | regulation of cell division |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence Send to blast |
METMPLIGWN SYTDENPFSF TTYQCFPYSG NSNEYFPVTF PKEEFPNDSY LDSFSVEYCN 60 YIPDPYQSLC IEPMSSSLQD YDFYDVEKGF FGWSEIDAGF ESEKVYLNFT DEKIVNEVKE 120 ELVDVKSGGE ERKCSNAKNL SRKIISQYFY MPITQAAREL NVGLTFLKKR CRELGIRRWP 180 HRKLMSLQTL INNFQDQMKE GGLESAEKLR YAIDALEREK KVVEEMPDMQ LEDGTKRLRQ 240 ACFKANYKKR KLMEDPQMF |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_004508743.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004508743.1 | 0.0 | protein RKD1 | ||||
TrEMBL | A0A1S2YRF4 | 0.0 | A0A1S2YRF4_CICAR; protein RKD1 | ||||
STRING | XP_004508743.1 | 0.0 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF6184 | 30 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G18790.1 | 4e-54 | RWP-RK domain-containing protein |