PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_004508165.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family | CAMTA | ||||||||
Protein Properties | Length: 922aa MW: 104818 Da PI: 7.3135 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 163.3 | 4.4e-51 | 30 | 146 | 3 | 118 |
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e + rwl+++ei+a+L n++ +++ ++ + pksg+++Ly+rk++r+frkDG++wkkkkdgktv+E+he+LKvg+ e +++yYah+++np+f r XP_004508165.1 30 EEaRIRWLRPNEIHAMLCNHKYFTVNVKPMNLPKSGTIVLYDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGQDNPNFVR 124 44599****************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 rcywlL+++le+ivlvhy+e++ XP_004508165.1 125 RCYWLLDKSLEHIVLVHYRETQ 146 *******************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51437 | 77.091 | 25 | 151 | IPR005559 | CG-1 DNA-binding domain |
SMART | SM01076 | 1.5E-74 | 28 | 146 | IPR005559 | CG-1 DNA-binding domain |
Pfam | PF03859 | 7.4E-45 | 31 | 144 | IPR005559 | CG-1 DNA-binding domain |
SuperFamily | SSF81296 | 1.22E-14 | 369 | 456 | IPR014756 | Immunoglobulin E-set |
Pfam | PF01833 | 4.1E-5 | 370 | 455 | IPR002909 | IPT domain |
SuperFamily | SSF48403 | 4.66E-19 | 546 | 667 | IPR020683 | Ankyrin repeat-containing domain |
Pfam | PF12796 | 5.4E-8 | 558 | 634 | IPR020683 | Ankyrin repeat-containing domain |
Gene3D | G3DSA:1.25.40.20 | 1.5E-17 | 560 | 667 | IPR020683 | Ankyrin repeat-containing domain |
CDD | cd00204 | 6.13E-16 | 563 | 664 | No hit | No description |
PROSITE profile | PS50297 | 16.282 | 572 | 637 | IPR020683 | Ankyrin repeat-containing domain |
SMART | SM00248 | 5.1E-6 | 605 | 634 | IPR002110 | Ankyrin repeat |
PROSITE profile | PS50088 | 11.434 | 605 | 637 | IPR002110 | Ankyrin repeat |
SMART | SM00248 | 4200 | 644 | 675 | IPR002110 | Ankyrin repeat |
SuperFamily | SSF52540 | 1.41E-8 | 711 | 819 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
SMART | SM00015 | 17 | 768 | 790 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 6.906 | 770 | 798 | IPR000048 | IQ motif, EF-hand binding site |
SMART | SM00015 | 0.19 | 791 | 813 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 7.913 | 792 | 816 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 0.014 | 796 | 813 | IPR000048 | IQ motif, EF-hand binding site |
SMART | SM00015 | 13 | 871 | 893 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 8.041 | 873 | 901 | IPR000048 | IQ motif, EF-hand binding site |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 922 aa Download sequence Send to blast |
MANNLTGQLV GSEIHGFHTL QELDVRGIME EARIRWLRPN EIHAMLCNHK YFTVNVKPMN 60 LPKSGTIVLY DRKMLRNFRK DGHNWKKKKD GKTVKEAHEH LKVGNEERIH VYYAHGQDNP 120 NFVRRCYWLL DKSLEHIVLV HYRETQESQG SPITPVNSNS TTASDPTAPW ILSEEIDSGT 180 TTAYAGEIND NITVRSHELK LHEINTLEWD DLVVANDLNT STAPNGGKVP YFGQQNQILL 240 NGNFSNVSTH ASTEIRSFDN STQPMAASNS VPYSFSESVT LQTVDSQGNR NEQRNHPVAS 300 GGVDSLDTLF NGRLQSQDSF GMWVNQIMSD SPCSVDELAL KSSVSSINEP YSSLVLDNQQ 360 LSLPEQVFNL TDVSPACASS TEKSQVLVTG FFHEDYMHIS KTNLMCVCGD ASVPAEIVHD 420 GVYRCWIPPH SPGLVNLYMS FDGHKPISQV VNFEYRTPIL HDPIESVEEK NNWDEFRLQM 480 RLAYLLFAKQ QSLDVIASKV SPSRLKEARE FSLKTSFISN SWQYLMKSTE DNQIPFSQAK 540 DALFGIALKN RLKEWLAERI VLGCKTTEYD AQGQSVIHLC AILGYTWAVT LFSWSGLSLD 600 FRDKFGWTAL HWAAYYGREK MVATLLSAGA KPNLVTDPTQ QNPDGCTAAD LAYNRGYHGL 660 SAYLSEKSLV EQFNDMSLAG NISGSLETSM DDPVNSENFT EEQIYMKDTL AAYRTAADAA 720 ARIQTAYREH SLKLQTEAVE FSSPEAEARK IVAAMKIQHA FRNFETKKVM AAAARIQHRF 780 RAWKIRREFV NKRLQAIKIQ AAFRCFQQRK QYRKIIWSVG VVEKAVLRWR LKRKGFRGLQ 840 INTAEAAGDQ NQHSDVEEEF FRTGRKQAEE RVERSVIRVQ AMFRSKKAQE DYRRMKLALN 900 QAKLEREYEK MLSTEVEMEL KT |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator (PubMed:14581622). Binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved in response to cold. Contributes together with CAMTA3 to the positive regulation of the cold-induced expression of DREB1A/CBF3, DREB1B/CBF1 and DREB1C/CBF2 (PubMed:28351986). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:14581622, ECO:0000269|PubMed:28351986, ECO:0000305|PubMed:11925432}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_004508165.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By heat shock, UVB, wounding, abscisic acid, H(2)O(2) and salicylic acid. {ECO:0000269|PubMed:12218065}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC126780 | 0.0 | AC126780.18 Medicago truncatula chromosome 8 clone mth2-10n4, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004508164.1 | 0.0 | calmodulin-binding transcription activator 5 isoform X2 | ||||
Swissprot | O23463 | 0.0 | CMTA5_ARATH; Calmodulin-binding transcription activator 5 | ||||
TrEMBL | A0A1S2YQ39 | 0.0 | A0A1S2YQ39_CICAR; calmodulin-binding transcription activator 5 isoform X2 | ||||
STRING | XP_004508164.1 | 0.0 | (Cicer arietinum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16150.1 | 0.0 | calmodulin binding;transcription regulators |
Publications ? help Back to Top | |||
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