PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_004506171.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family | bZIP | ||||||||
Protein Properties | Length: 493aa MW: 54646.3 Da PI: 6.514 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.6 | 3.7e-10 | 191 | 221 | 5 | 35 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekv 35 k rr+++NReAA++sR+RKka++++Le+ XP_004506171.1 191 KTLRRLAQNREAAKKSRLRKKAYVQQLETSR 221 6789************************855 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.1E-6 | 182 | 232 | No hit | No description |
SMART | SM00338 | 4.3E-5 | 187 | 245 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.956 | 189 | 233 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.4E-7 | 191 | 231 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.38E-6 | 191 | 233 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 194 | 209 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 1.6E-25 | 272 | 346 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 493 aa Download sequence Send to blast |
MASQRIGEIG SSESEPSSQH VPYGVLHGIT TSTSSLMNQG SSFDFGELEE AIVLQGIKIR 60 NDEGKASLFT SKPAATLEMF PSWPIRFQQT PRLVASLTSP SLTNPYGGSK SGGESTDSGS 120 TELQFDTDSP ISVKASSSDH QNRAFDQIQQ QETATNDVLR TETSQNQSTA KSYQEKKKGA 180 SSTSEKTLDP KTLRRLAQNR EAAKKSRLRK KAYVQQLETS RLRLANLEQD LQRARSQGLF 240 MGCGGNTSPG KPGAAIFDME YARWVEEDER QLVEVRNGLQ GALTDNELRV IVEGYLCHYD 300 ELFQLKGVAV HSDVFHLING IWTSPAERPF LWIGGFRPSD LITMLMQQLE PLAEQQMVGI 360 CELRHSSHQA EDALTQGHEQ LQHSIVHTIA GGPVVDGVQQ MVAAMAKISS LEGFVRQGDN 420 LRQQSLHQLC RILTVRQAAR CFLIIGEYYG RLRALSSLWT SRPRETLITD DNSCQATTEL 480 QMLQPSHSHF SSF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Together with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_004506171.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004506171.1 | 0.0 | transcription factor TGA9 isoform X1 | ||||
Swissprot | Q93XM6 | 0.0 | TGA9_ARATH; Transcription factor TGA9 | ||||
TrEMBL | A0A1S2YKW4 | 0.0 | A0A1S2YKW4_CICAR; transcription factor TGA9 isoform X1 | ||||
STRING | XP_004506170.1 | 0.0 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4555 | 33 | 57 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08320.3 | 0.0 | bZIP family protein |
Publications ? help Back to Top | |||
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