PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004506013.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family GATA
Protein Properties Length: 317aa    MW: 35842.6 Da    PI: 9.423
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004506013.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.16e-19230263134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C +C +t+Tp+WR+gp g+ktLCnaCG++yr+ +
  XP_004506013.1 230 CMHCEVTETPQWREGPKGPKTLCNACGVRYRSGR 263
                     99*****************************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004019.5E-17224274IPR000679Zinc finger, GATA-type
PROSITE profilePS5011411.925224260IPR000679Zinc finger, GATA-type
SuperFamilySSF577162.76E-14227287No hitNo description
Gene3DG3DSA:3.30.50.106.8E-15228261IPR013088Zinc finger, NHR/GATA-type
CDDcd002026.27E-15229276No hitNo description
PROSITE patternPS003440230255IPR000679Zinc finger, GATA-type
PfamPF003207.0E-17230263IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MKTNWFFDQN FNGVSEDILE DVIEFFDFRL DDVELTDVVE EDWNAQFKHL EEPSLGVFSV  60
PSSGLCGEIE TQNEKPKLGK SFSAAELSHI DGRNIVNSSL KDRQVLLAKT AGPAYGKTIP  120
IQNVSFNGKD LRRCQTYSPV SVFESSSYSS VDNFNFELPV IPAKRPRSKC RRRLSTFDKL  180
FSIPFISTPP AFRKRQRLAA SESVCRVQRK QRKTDSIRMK SQESVAPRKC MHCEVTETPQ  240
WREGPKGPKT LCNACGVRYR SGRLFPEYRP AASPTFEASS HSNSHKKVLE MRNKASQETF  300
KGSSMLYLSS NLPGSSV
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004506013.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027191282.10.0GATA transcription factor 11-like
TrEMBLA0A3Q7YCB10.0A0A3Q7YCB1_CICAR; GATA transcription factor 11-like
STRINGXP_004506013.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF57582849
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.21e-37GATA family protein