PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_004505949.1

Organism

Cicer arietinum

Taxonomic ID

3827

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer

Family

Dof

Protein Properties

Length: 279aa MW: 31372.9 Da PI: 7.9048

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_004505949.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	128.7	1.7e-40	35	96	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 +e+alkcprCds+ntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk+sss XP_004505949.1 35 PEQALKCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSS 96 7899******************************************************9875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-28	36	93	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	3.8E-34	37	93	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.609	39	93	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	41	77	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005730	Cellular Component	nucleolus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence Send to blast
MDSSSGQHQQ MSNESLENML ACSKAQQDKK PKPQPEQALK CPRCDSSNTK FCYYNNYSLS 60 QPRYFCKSCR RYWTKGGTLR NVPVGGGCRK NKRSSSLTSS KRVQDQTFNT NIPNPLTCFP 120 SLSYDTNDLT LALARLQKGQ LGFEHEHDFS KFGNHTSTNT NTSCDILNNH GLNNSSTNQG 180 FLEALMGSQN NVYYDNVGVS GEMMLPYDHE MSIATTQAVS VTTMKQEMCN VREQNENRVL 240 WGFPWQLNGD TNMNEVESGR ASWNGLTPSW HGLLNSPLM

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_004505949.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004505949.1	0.0	dof zinc finger protein DOF2.1
TrEMBL	A0A1S2YKC6	0.0	A0A1S2YKC6_CICAR; dof zinc finger protein DOF2.1
STRING	XP_004505949.1	0.0	(Cicer arietinum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF5026	30	51

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28510.1	6e-57	Dof family protein