PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_004505530.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family | VOZ | ||||||||
Protein Properties | Length: 486aa MW: 54755 Da PI: 5.3532 | ||||||||
Description | VOZ family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | VOZ | 423.2 | 4e-130 | 243 | 459 | 1 | 217 |
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaael 95 pppsaf gpkcalwdc+rpaqg e +qdycss+h+ la neglpg+tp+lrp gid+kdg+lfaa+ ak+qgkevgip+cegaa++k+pwna+e+ XP_004505530.1 243 PPPSAFRGPKCALWDCFRPAQGLEGCQDYCSSCHELLANNEGLPGMTPILRPYGIDVKDGPLFAAVLAKTQGKEVGIPKCEGAASTKAPWNASEF 337 89********************************************************************************************* PP VOZ 96 fdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklv 190 fdls+l+get+rewlffdkprraf+sgnrkqrslpdysgrgwhesrkqvmke+gg+krsyymdpqp+s++ewhl+eyein+ d +alyrlelklv XP_004505530.1 338 FDLSFLDGETVREWLFFDKPRRAFDSGNRKQRSLPDYSGRGWHESRKQVMKEHGGQKRSYYMDPQPLSYLEWHLFEYEINNHDGCALYRLELKLV 432 *********************************************************************************************** PP VOZ 191 dekksakgkvskdsladlqkklgrlta 217 d+kks+kgkv+k+sl+dlq+k+g+lta XP_004505530.1 433 DKKKSPKGKVTKESLTDLQNKMGKLTA 459 *************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 486 aa Download sequence Send to blast |
MMKENFNGKC GSSSHKSMKE KEKYLVDKIQ GIFSNIQLAR KESRANDIVI FEEQMHQLLR 60 EWQAELESPA TSLADGSLGS FTGDLAQLLQ AIEEKDDATS PLTKLVPLKN DLHQNNISDS 120 NYPFFQEKCF NNNQTLDHTF EGSASTLFNN PLNSSDMAQL HYHPFSLNQD MDHNTVGHNS 180 DLIGQFDFYH QDLSLGHNTE IKNSESAQFT FDEGFDCSQF LRDDDTAQFG ENHIPNILPS 240 IRPPPSAFRG PKCALWDCFR PAQGLEGCQD YCSSCHELLA NNEGLPGMTP ILRPYGIDVK 300 DGPLFAAVLA KTQGKEVGIP KCEGAASTKA PWNASEFFDL SFLDGETVRE WLFFDKPRRA 360 FDSGNRKQRS LPDYSGRGWH ESRKQVMKEH GGQKRSYYMD PQPLSYLEWH LFEYEINNHD 420 GCALYRLELK LVDKKKSPKG KVTKESLTDL QNKMGKLTAA FPSSDDGNPV KGKTDAKSED 480 IGPPEN |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_004505530.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004505530.1 | 0.0 | transcription factor VOZ1 | ||||
Refseq | XP_004505531.1 | 0.0 | transcription factor VOZ1 | ||||
Refseq | XP_012572680.1 | 0.0 | transcription factor VOZ1 | ||||
Refseq | XP_027191648.1 | 0.0 | transcription factor VOZ1 | ||||
Swissprot | Q9SGQ0 | 1e-152 | VOZ1_ARATH; Transcription factor VOZ1 | ||||
TrEMBL | A0A1S3EA29 | 0.0 | A0A1S3EA29_CICAR; transcription factor VOZ1 | ||||
STRING | XP_004505529.1 | 0.0 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1498 | 34 | 94 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28520.2 | 1e-148 | vascular plant one zinc finger protein |
Publications ? help Back to Top | |||
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