PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004505417.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family G2-like
Protein Properties Length: 332aa    MW: 37311.9 Da    PI: 5.9081
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004505417.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like986.7e-312074155
         G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                    kprl+WtpeLH+rF ea++qLGG+ekAtPk+++++m+++gLtl+h+kSHLQkYRl
  XP_004505417.1 20 KPRLKWTPELHQRFAEAIHQLGGAEKATPKSLMRAMGIPGLTLYHLKSHLQKYRL 74
                    79****************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.6E-291876IPR009057Homeodomain-like
SuperFamilySSF466891.16E-151975IPR009057Homeodomain-like
TIGRFAMsTIGR015576.3E-222075IPR006447Myb domain, plants
PfamPF002496.3E-92273IPR001005SANT/Myb domain
PfamPF143791.9E-21117162IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MDQKNVQNQS MRLVLSTDAK PRLKWTPELH QRFAEAIHQL GGAEKATPKS LMRAMGIPGL  60
TLYHLKSHLQ KYRLGKSQLL ETCSDNKQDY VEIQSSDSQC SREISVENQN QTSESLKISE  120
ALQIQMEVQK KLYEQIEVQK HLQFRIEAQG KYLQSVLMKA QEALAGYSSS STVGVEHAKA  180
ELSQLLSIIN NACPSSPISE LTETRGLSLN FGERKQNRGT MCSLESSLTS SESSERKDEK  240
HFINEAENIP NCNSVSVELP LLAIHPEDEG SGRKRSAETD FDDSCVDQPE GKRCAKKLRK  300
FELSQMLDLN SKYERDIDSC SSEIDLNCSS SF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A1e-191976158Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B1e-191976158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A1e-191976158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C1e-191976158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D1e-191976158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F1e-191976158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H1e-191976158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J1e-191976158Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004505417.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004505417.10.0myb family transcription factor PHL8-like
SwissprotF4I2743e-83PHL8_ARATH; Myb family transcription factor PHL8
TrEMBLA0A1S2YIT50.0A0A1S2YIT5_CICAR; myb family transcription factor PHL8-like
STRINGXP_004505417.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF52183253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69580.11e-83G2-like family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]