PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_004505414.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family | bHLH | ||||||||
Protein Properties | Length: 253aa MW: 29013.8 Da PI: 7.5365 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33 | 1.1e-10 | 51 | 97 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h +Er RR+++++ ++ L +llP++ p K + ++iL +Av+ I++Lq XP_004505414.1 51 HLWIERERRKKMRNMYDILHSLLPHL---P-SKADSSTILDEAVKQIQNLQ 97 6669*********************7...4.67788**************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 12.614 | 46 | 96 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.57E-14 | 49 | 124 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.2E-13 | 49 | 110 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 5.97E-9 | 49 | 98 | No hit | No description |
Pfam | PF00010 | 6.4E-8 | 51 | 97 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.3E-7 | 52 | 102 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence Send to blast |
MNVDDDDDVA VFMQENESWS PSNSDETRRE EVNKKRSREE VASKNVTDSN HLWIERERRK 60 KMRNMYDILH SLLPHLPSKA DSSTILDEAV KQIQNLQQTL KKLEKQKQEK LKSIYQFRCE 120 SSTINSQRHP YKSREVFISG EGSSSSNSVN AFSTPRPTVA FQSWYSSNVV LNICGDEAQF 180 CICATRKPGL LTTVAFVMEK HSIALIYANI FCNGIGYMIQ AHVKRVSHEF QDAIILAEET 240 YKQAAEEIKK LIS |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_004505414.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004505414.1 | 0.0 | transcription factor bHLH95-like | ||||
TrEMBL | A0A1S2YJE6 | 0.0 | A0A1S2YJE6_CICAR; transcription factor bHLH95-like | ||||
STRING | XP_004505414.1 | 0.0 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4773 | 33 | 58 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49770.1 | 1e-15 | bHLH family protein |