PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004505182.2
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family G2-like
Protein Properties Length: 411aa    MW: 45797 Da    PI: 6.435
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004505182.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like1023.8e-32269324156
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                     k+r++W+peLH+rFv+a+++LGGs+ AtPk+i+elm+v+gLt+++vkSHLQkYRl+
  XP_004505182.2 269 KQRRCWSPELHRRFVSALQKLGGSQAATPKQIRELMQVDGLTNDEVKSHLQKYRLH 324
                     79****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.2E-29266327IPR009057Homeodomain-like
PROSITE profilePS5129414.56266326IPR017930Myb domain
SuperFamilySSF466896.4E-18266327IPR009057Homeodomain-like
TIGRFAMsTIGR015571.0E-26269324IPR006447Myb domain, plants
PfamPF002496.3E-8271322IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 411 aa     Download sequence    Send to blast
MGSLPSELTL DLRPTFLPKT ISDFLLDLSS IQPTSDKLSK LHDFLSRLED ELKKIDAFKR  60
ELPLCMFLLN DAILVLKEEL EKCRVQNSLP VLEEFIPLKK EIDQSEENNN DDDDNNNNEC  120
RDKMNWMSSV QLWNNNNTTT NNNASDQKHN HNKLETKKME EEEQSVTVAE EPIFQPCSSN  180
RNGGSAFMPF STYSSVPVTT VTLAAPKQEK EDTVINRLSL LTPGMKSLRE GFGSRGSRGS  240
SSRAVSSSPP TVHPSLRAGP LQPQQTSRKQ RRCWSPELHR RFVSALQKLG GSQAATPKQI  300
RELMQVDGLT NDEVKSHLQK YRLHTRRGPA SSSNQSVVVL GGLWMSQEQY NESSKGSSSA  360
SGSPQSPLHL ATGSRGGTSP TEDDSLEDDE DAKSENYSWK SHIQRPGKVG V
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A4e-14269322255Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B4e-14269322255Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A4e-14269322154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B4e-14269322154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C4e-14269322154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D4e-14269322154Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A4e-14269322255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C4e-14269322255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D4e-14269322255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F4e-14269322255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H4e-14269322255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J4e-14269322255Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004505182.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004505182.20.0myb family transcription factor EFM isoform X1
TrEMBLA0A1S2YI810.0A0A1S2YI81_CICAR; myb family transcription factor EFM isoform X1
STRINGXP_004505182.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF120834107
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37180.12e-45G2-like family protein