PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004505138.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 273aa    MW: 30055.4 Da    PI: 7.9597
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004505138.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.71.5e-1177124354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h+e+E+rRR+riN  +++Lr l+ +     ++K++Ka+ L +++  +k+L
  XP_004505138.1  77 KNHSEAEKRRRERINGHLATLRGLVAST----NQKMDKATLLGEVISQVKQL 124
                     58*************************9....9*************999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.48874124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.68E-1177126No hitNo description
Gene3DG3DSA:4.10.280.101.0E-1277130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.1E-1377131IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.3E-977124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.1E-1080130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048730.00105163206No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MVYTFCDTIS SSGYDSLDLF NPTLHDFGAS NGVSRNGLPT SDSLILESEK EKVVKCPVTA  60
KVGKDEISQA KVLAAMKNHS EAEKRRRERI NGHLATLRGL VASTNQKMDK ATLLGEVISQ  120
VKQLKKNATE ASKGYLIPME TDEVKVEPYN VEERNGCMSY IATICCDFQP EILSDLRKTL  180
DALQLQLVKA EMSTLENRMK NVFIFTCCKG DSINNVKACQ SIANVVHKAL GSVLEKASNS  240
LEFSLGSSYP NKRRRMCFVE ASTSCNHGSC CTC
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004505138.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004505138.10.0transcription factor bHLH106-like
TrEMBLA0A1S2YIM30.0A0A1S2YIM3_CICAR; transcription factor bHLH106-like
STRINGXP_004505138.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF89863143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56770.14e-31bHLH family protein