PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004504801.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family CAMTA
Protein Properties Length: 1072aa    MW: 120157 Da    PI: 5.3672
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004504801.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1182.83.9e-57241384118
            CG-1   4 ekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrc 98 
                      ++rwl++ ei++iL+n++ +++t e+++rp+sgsl+L++rk++ryfrkDG++w+kkkdgktvrE+hekLKvg+v+vl+cyYah+een++fqrr+
  XP_004504801.1  24 AQHRWLRPAEICEILKNYQMFQITPEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEENENFQRRS 118
                     49********************************************************************************************* PP

            CG-1  99 ywlLeeelekivlvhylevk 118
                     yw+Le ++ +iv+vhyl+vk
  XP_004504801.1 119 YWMLEPDMMHIVFVHYLDVK 138
                     *****************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143783.85817143IPR005559CG-1 DNA-binding domain
SMARTSM010766.5E-8220138IPR005559CG-1 DNA-binding domain
PfamPF038591.5E-5123137IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.103.7E-6474571IPR013783Immunoglobulin-like fold
SuperFamilySSF812965.13E-17485570IPR014756Immunoglobulin E-set
PfamPF018336.1E-6485570IPR002909IPT domain
SuperFamilySSF484032.18E-15660778IPR020683Ankyrin repeat-containing domain
CDDcd002041.70E-12674777No hitNo description
Gene3DG3DSA:1.25.40.202.8E-16676780IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029717.396685793IPR020683Ankyrin repeat-containing domain
SMARTSM002480.01718747IPR002110Ankyrin repeat
PfamPF000230.0012718743IPR002110Ankyrin repeat
PROSITE profilePS5008810.179718750IPR002110Ankyrin repeat
SMARTSM002481900757786IPR002110Ankyrin repeat
SMARTSM000159.9894916IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.261895924IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525401.25E-6896945IPR027417P-loop containing nucleoside triphosphate hydrolase
PfamPF006120.0074897915IPR000048IQ motif, EF-hand binding site
SMARTSM000150.17917939IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.633918942IPR000048IQ motif, EF-hand binding site
PfamPF006128.8E-4920939IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1072 aa     Download sequence    Send to blast
MADRGASSYG LTPRLDIQQL QFEAQHRWLR PAEICEILKN YQMFQITPEP PSRPPSGSLF  60
LFDRKVLRYF RKDGHNWRKK KDGKTVREAH EKLKVGSVDV LHCYYAHGEE NENFQRRSYW  120
MLEPDMMHIV FVHYLDVKVN KTNIGASTDT NEVTSDSQNG SSVSSGFPAN YGNTPSGSTD  180
SMSPTSTLTS LCEDADSEDI HQTSSGFHAF HGSQNLGNGP PMDKIDARSN SSYLTHPLSG  240
TNYLPLVQGV KSNPSDITYI EGQRHIIASW DNVVEKSAGS HSDPSLVSTN SIPSSSMENT  300
IEQEQTVFTE VGGASQSLQS NWQIPFEENT GEFPKWSFTQ SSSLEFGSDY TTGLLGKENY  360
NGSPETDPGL FSFNYEPEEQ SVQQNLSMQH AHGQSQDALT TECDEIHGEQ SINYALTMKR  420
VFMDAEESLK KVDSFSRWIS KELAAVDDLH MQSSPGVSWG TDECGNVIDE TSLNLSLSQD  480
QLFSINDFSP KWAYAESEIE VLIIGTFLKS QPEMATCNWS CMFGEVEVPA TVLANGILCC  540
QAPPHEIGRV PFYVTFSNRF ACSEVREFEY KEGYTRNVDL ADFVNSSTEM LHHLQLDELL  600
SLNSVHPSNQ VFEDDMEKRN LILKLISLKE EEEYSSNEEP TVEMNISEYR LNAHKFHRQV  660
KEKLYSWLLH KVTETGKGPH VFGKDGQGVL HLVAALGYDW AIAPIVTAGV IINFRDVNGW  720
TALHWAASCG RERTVALLVS MGAAAGALTD PCPAFPSGRT PADLASNNGH KGISGFLAES  780
LLTSHLESLT VDDVNKDGTK ENLGMKAVQT FSERIATPVF CGDVPDAICL KDSLDAVRNA  840
TQAADRIHQV YRMQSFQRKQ LAQYEDDDEF GLLDQQALLL LASKGRKSGH GEGSANAAAI  900
QIQKKFRGWT KRKEFLFIRQ RVVKIQALVR GHQVRKKYKP IIWSVGILEK VVLRWRRKGS  960
GLRGFRPDAL NKVPNQPSND PAKEDDYDFL KEGRKQSEER FKKALTRVKS MAQYPEARAQ  1020
YRRLLNVVDD FRHTKQACNL SLINSEEAVD GVEDLIDIDM LLDDNFLPIA FD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cxk_A8e-14485573991calmodulin binding transcription activator 1
2cxk_B8e-14485573991calmodulin binding transcription activator 1
2cxk_C8e-14485573991calmodulin binding transcription activator 1
2cxk_D8e-14485573991calmodulin binding transcription activator 1
2cxk_E8e-14485573991calmodulin binding transcription activator 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved in freezing tolerance in association with CAMTA1 and CAMTA3. Contributes together with CAMTA1 and CAMTA3 to the positive regulation of the cold-induced expression of DREB1A/CBF3, DREB1B/CBF1 and DREB1C/CBF2 (PubMed:23581962). Involved together with CAMTA3 and CAMTA4 in the positive regulation of a general stress response (PubMed:25039701). Involved in tolerance to aluminum. Binds to the promoter of ALMT1 transporter and contributes to the positive regulation of aluminum-induced expression of ALMT1 (PubMed:25627216). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:23581962, ECO:0000269|PubMed:25039701, ECO:0000269|PubMed:25627216, ECO:0000305|PubMed:11925432}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004504801.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salt, wounding, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by aluminum (PubMed:25627216). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:25627216}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004504801.10.0calmodulin-binding transcription activator 2-like isoform X3
SwissprotQ6NPP40.0CMTA2_ARATH; Calmodulin-binding transcription activator 2
TrEMBLA0A1S2YHA80.0A0A1S2YHA8_CICAR; calmodulin-binding transcription activator 2-like isoform X3
STRINGXP_004504800.10.0(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.20.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains
Publications ? help Back to Top
  1. Benn G, et al.
    A key general stress response motif is regulated non-uniformly by CAMTA transcription factors.
    Plant J., 2014. 80(1): p. 82-92
    [PMID:25039701]
  2. Kidokoro S, et al.
    Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature.
    Plant Cell, 2017. 29(4): p. 760-774
    [PMID:28351986]