PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004504738.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family WRKY
Protein Properties Length: 487aa    MW: 54579.4 Da    PI: 6.4607
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004504738.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.73.3e-30244303159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dg++WrKYGqK  kg+++pr+YYrCt a gCpv+k+v+r+ +d +++++tYeg+Hnh+
  XP_004504738.1 244 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCIDDMSILITTYEGTHNHP 303
                     58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.1E-32229305IPR003657WRKY domain
SuperFamilySSF1182907.85E-28237305IPR003657WRKY domain
PROSITE profilePS5081129.207239305IPR003657WRKY domain
SMARTSM007742.7E-37244304IPR003657WRKY domain
PfamPF031062.5E-27245303IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 487 aa     Download sequence    Send to blast
MDRGKEHKKM EVDLSLKIDS NDEQEVEEAK VDHEHVMKED DKEEVHETTA GEIEDDASII  60
QFSLQDNTKT KELSDLQIEM ESMKEENKVL RKVVEQTMKD YYDLQTKFSI IQENNNNNNN  120
NNKRKDHQLS LSLQDNNAST SGEGPSRIHD MFSTKKIQRV SSLVPNNNTH DSISESELSL  180
SLRLQTSTSQ KDPEEKKEQL ASFESVQNKL QRVHDLPGIM NHVASPPNRK ARVSVRARCE  240
TATMNDGCQW RKYGQKIAKG NPCPRAYYRC TVAPGCPVRK QVQRCIDDMS ILITTYEGTH  300
NHPLPVGATA MASTASAAAS FMLLESSNPL ISNGFTTQQQ SFNPYYNTFH HPLNPSSNIR  360
SIDPNDPSQG IVLDLTNNNN LNEPPRRFST GSSSSNTTAF SWMPNKFQNS SSAIAMNNNF  420
QNPRVPLENI NIWKGEENKT VDNNNNNNNV SAIASDPKFR LAVAAAITSL MNKDSHTTNG  480
GQNGKHV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-22231307176WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004504738.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004504738.10.0probable WRKY transcription factor 9 isoform X1
TrEMBLA0A1S2YI040.0A0A1S2YI04_CICAR; probable WRKY transcription factor 9 isoform X1
STRINGXP_004504738.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF93203141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.12e-73WRKY DNA-binding protein 9