PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004504639.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 480aa    MW: 53556.9 Da    PI: 5.5984
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004504639.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.81.9e-13285331354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h + E++RR+++N ++  Lr+l+P++     +K++ a+++  A+eYI++L
  XP_004504639.1 285 TKHFATEKQRREQLNGKYKILRSLIPNP-----TKVDRASVVGDAIEYIREL 331
                     79**************************.....9****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.7E-14280349IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.294282331IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.6E-11284333IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.53E-11285331No hitNo description
PfamPF000107.0E-11285331IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.2E-11288337IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0048658Biological Processanther wall tapetum development
GO:0052543Biological Processcallose deposition in cell wall
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    Send to blast
MSSGSGDRQN MHDQTDCFDP NTMAEDVNFS QILQNQTTNS NNSLEENLRP SMNEVSTLTN  60
GLTLSSIDIE QQNLGLNIGN SYNNNMDNHL VQEVYQHSTW DSSVQEMQDI CYANHQEHHQ  120
LHEQHFQQIV EAQNCSQSYN PSSILDPPYP SPDLLNLLHL PRCSASSLLT NPSNICITNS  180
TQKTPNFQSS MNFLGDLPIG SDNISGSSVL YDPLFHLNLP PQPPALRELF QSLPRGYSLP  240
TSSRNGSLFG GGDEMEGDGS QLDMGVLEFN RVTASVGKGR RGKATKHFAT EKQRREQLNG  300
KYKILRSLIP NPTKVDRASV VGDAIEYIRE LVRTKNELTL LVERKRHGRE MSKRLKTEDD  360
AAESCNIKPF GDADGSIRTS WLQRKSKDSE VDVRIIDNDV TIKLIQRKKV NCLLFVSKVL  420
DELQLELCHV AGGLVGEYFS FLLNSKVIEG SSVYASAIAN RVIDVLDTQY AAVVPNLSRL
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004504639.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004504639.10.0transcription factor bHLH91-like
TrEMBLA0A1S2YGX70.0A0A1S2YGX7_CICAR; transcription factor bHLH91-like
STRINGXP_004504639.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37433262
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.13e-95bHLH family protein