PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004504405.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family CAMTA
Protein Properties Length: 988aa    MW: 110213 Da    PI: 6.134
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004504405.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1175.95.3e-55131292117
            CG-1   2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 
                     ++e ++rwlk+ e++ iL+n+ek+++t+e++++p+sgsl+L+nr+++r+fr+DG+ w+kk+dg++v E+he+LKvg+ve+l+cyYah+e+ ptfq
  XP_004504405.1  13 YQEaQRRWLKPAEVMYILQNHEKYQFTQEPPQQPTSGSLFLFNRRVLRFFRRDGHAWRKKRDGRAVGEAHERLKVGNVEALNCYYAHGEQIPTFQ 107
                     566699***************************************************************************************** PP

            CG-1  96 rrcywlLeeelekivlvhylev 117
                     rr+yw+L+ ++++ivlvhy+++
  XP_004504405.1 108 RRSYWMLDPAFDHIVLVHYRDT 129
                     *******************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143779.6929135IPR005559CG-1 DNA-binding domain
SMARTSM010763.6E-7612130IPR005559CG-1 DNA-binding domain
PfamPF038592.6E-4715128IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.104.8E-9419510IPR013783Immunoglobulin-like fold
SuperFamilySSF812969.8E-18425509IPR014756Immunoglobulin E-set
PfamPF018334.5E-8425508IPR002909IPT domain
CDDcd001029.02E-6425510No hitNo description
Gene3DG3DSA:1.25.40.204.7E-15619715IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029714.955621713IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484036.37E-16623715IPR020683Ankyrin repeat-containing domain
CDDcd002048.48E-13626713No hitNo description
PfamPF127962.9E-7636714IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5008811.06654686IPR002110Ankyrin repeat
SMARTSM002480.0038654683IPR002110Ankyrin repeat
SMARTSM00015100771793IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500966.961772801IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525402.66E-8772877IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000150.18829851IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.224831859IPR000048IQ motif, EF-hand binding site
PfamPF006120.0047832850IPR000048IQ motif, EF-hand binding site
SMARTSM000154.2E-4852874IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.359853878IPR000048IQ motif, EF-hand binding site
PfamPF006123.0E-5855874IPR000048IQ motif, EF-hand binding site
SMARTSM002482200897926IPR002110Ankyrin repeat
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 988 aa     Download sequence    Send to blast
MASGYEYDIN DLYQEAQRRW LKPAEVMYIL QNHEKYQFTQ EPPQQPTSGS LFLFNRRVLR  60
FFRRDGHAWR KKRDGRAVGE AHERLKVGNV EALNCYYAHG EQIPTFQRRS YWMLDPAFDH  120
IVLVHYRDTS EGRLSSGPGT QLSPGSSSAF SQSPSSYSNQ NPGSTSIVDD SYERNQSFSS  180
PGSAEVTSDI FILNNGMAHL EGADAESGTS TELKITQALR RLEVQLSLNE DNFEEIAPFS  240
NEDEATRDSK PQNHQGVICK QEKSEALSGP DDQGQFCDGY NARQGDSGQS YREFLDHDFP  300
DGNEKVLSWT ELKKLNKFSS VASPQKNVYM PAGNDGSPSV SIREPVTSPE NCCWTNFNTN  360
INNAGNSVFS LPQDVGGVTL PPYSSMVETR EIHSGYYATL FDQSQIGASL EAGSSLTVSQ  420
KQKFTIKAVS PEWGYASETT KVFIIGSFLC HPSDSAWACM LGDVEVPVEM IQDGVMCCEV  480
PSHIPGKVTL CITSGNRESC SEVREFEYRD KTKSCTHCTP SETEATRTPE ELLLLVRFGQ  540
MLLSASSVSN DNNNESGIII KQKADDDSWS HIIEALLFGS GTSFGTINWL LEELLKDKLQ  600
LWLTCRPWEA DEETGCSLTK KEQGIIHMVA GLGFEWALNP ILSCGVNINF RDINGWTALH  660
WAARFGREKM VASLIASGAS AGAVTDPSAQ DPIGKTAAAI ASSSGHKGLA GYLSEVALTS  720
HLSSLKLEES ELSKSSAELQ ADLTVSNVSK ENIASSEDPT SLKDTLAAIR NTTQAAARIQ  780
AAFRTHSFRK RRANEAVAGM SRHDISASSI GNMPELSAMS KLAFRNPREF NSAALSIQKK  840
YRGWKSRRDF LSLRQKVVKI QAHVRGYQVR KHYKVLWAVG ILDKVVLRWR RKRSGLRGFR  900
PEMETNENQD EDILKVFRKQ KVDVEIEEAV SRVLSMVKSP DARQQYHRML EKFRQAKAEL  960
LASTSEEKLL STSVEDYLNM EDDYYQYP
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved together with CAMTA2 and CAMTA3 in the positive regulation of a general stress response (PubMed:25039701). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:25039701, ECO:0000305|PubMed:11925432}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004504405.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By heat shock, UVB, salt, wounding, ethylene, methyl jasmonate, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by cold stress (PubMed:28351986). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:28351986}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004504405.10.0calmodulin-binding transcription activator 4 isoform X4
SwissprotQ9FYG20.0CMTA4_ARATH; Calmodulin-binding transcription activator 4
TrEMBLA0A1S2YGD50.0A0A1S2YGD5_CICAR; calmodulin-binding transcription activator 4 isoform X4
STRINGXP_004504403.10.0(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.10.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains
Publications ? help Back to Top
  1. Benn G, et al.
    A key general stress response motif is regulated non-uniformly by CAMTA transcription factors.
    Plant J., 2014. 80(1): p. 82-92
    [PMID:25039701]
  2. Kidokoro S, et al.
    Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature.
    Plant Cell, 2017. 29(4): p. 760-774
    [PMID:28351986]