PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004504404.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family CAMTA
Protein Properties Length: 989aa    MW: 110341 Da    PI: 6.134
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004504404.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1175.95.3e-55131292117
            CG-1   2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 
                     ++e ++rwlk+ e++ iL+n+ek+++t+e++++p+sgsl+L+nr+++r+fr+DG+ w+kk+dg++v E+he+LKvg+ve+l+cyYah+e+ ptfq
  XP_004504404.1  13 YQEaQRRWLKPAEVMYILQNHEKYQFTQEPPQQPTSGSLFLFNRRVLRFFRRDGHAWRKKRDGRAVGEAHERLKVGNVEALNCYYAHGEQIPTFQ 107
                     566699***************************************************************************************** PP

            CG-1  96 rrcywlLeeelekivlvhylev 117
                     rr+yw+L+ ++++ivlvhy+++
  XP_004504404.1 108 RRSYWMLDPAFDHIVLVHYRDT 129
                     *******************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143779.6929135IPR005559CG-1 DNA-binding domain
SMARTSM010763.6E-7612130IPR005559CG-1 DNA-binding domain
PfamPF038592.6E-4715128IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.104.8E-9420511IPR013783Immunoglobulin-like fold
PfamPF018334.5E-8426509IPR002909IPT domain
SuperFamilySSF812969.8E-18426510IPR014756Immunoglobulin E-set
CDDcd001029.03E-6426511No hitNo description
Gene3DG3DSA:1.25.40.204.7E-15620716IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029714.955622714IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484036.37E-16624716IPR020683Ankyrin repeat-containing domain
CDDcd002048.49E-13627714No hitNo description
PfamPF127962.9E-7637715IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5008811.06655687IPR002110Ankyrin repeat
SMARTSM002480.0038655684IPR002110Ankyrin repeat
SMARTSM00015100772794IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525402.66E-8773878IPR027417P-loop containing nucleoside triphosphate hydrolase
PROSITE profilePS500966.961773802IPR000048IQ motif, EF-hand binding site
SMARTSM000150.18830852IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.224832860IPR000048IQ motif, EF-hand binding site
PfamPF006120.0047833851IPR000048IQ motif, EF-hand binding site
SMARTSM000154.2E-4853875IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.359854879IPR000048IQ motif, EF-hand binding site
PfamPF006123.0E-5856875IPR000048IQ motif, EF-hand binding site
SMARTSM002482200898927IPR002110Ankyrin repeat
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 989 aa     Download sequence    Send to blast
MASGYEYDIN DLYQEAQRRW LKPAEVMYIL QNHEKYQFTQ EPPQQPTSGS LFLFNRRVLR  60
FFRRDGHAWR KKRDGRAVGE AHERLKVGNV EALNCYYAHG EQIPTFQRRS YWMLDPAFDH  120
IVLVHYRDTS EGRLSSGPGT QLSPGSSSAF SQSPSSYSNQ NPGSTSIVDD SYERNQSFSS  180
PGSAEVTSDI FILNNGMAHL EGADAESGTS TELKITQALR RLEVQLSLNE DNFEEIAPFS  240
NEDEATRDSK PQNHQGVICK QEKSEALSGP DDQGQFCDGY NARQGDSGQS YREFLDHDFP  300
DGNEKVLSWT ELKKLNKFSS VASPQKNVYM PAGNQDGSPS VSIREPVTSP ENCCWTNFNT  360
NINNAGNSVF SLPQDVGGVT LPPYSSMVET REIHSGYYAT LFDQSQIGAS LEAGSSLTVS  420
QKQKFTIKAV SPEWGYASET TKVFIIGSFL CHPSDSAWAC MLGDVEVPVE MIQDGVMCCE  480
VPSHIPGKVT LCITSGNRES CSEVREFEYR DKTKSCTHCT PSETEATRTP EELLLLVRFG  540
QMLLSASSVS NDNNNESGII IKQKADDDSW SHIIEALLFG SGTSFGTINW LLEELLKDKL  600
QLWLTCRPWE ADEETGCSLT KKEQGIIHMV AGLGFEWALN PILSCGVNIN FRDINGWTAL  660
HWAARFGREK MVASLIASGA SAGAVTDPSA QDPIGKTAAA IASSSGHKGL AGYLSEVALT  720
SHLSSLKLEE SELSKSSAEL QADLTVSNVS KENIASSEDP TSLKDTLAAI RNTTQAAARI  780
QAAFRTHSFR KRRANEAVAG MSRHDISASS IGNMPELSAM SKLAFRNPRE FNSAALSIQK  840
KYRGWKSRRD FLSLRQKVVK IQAHVRGYQV RKHYKVLWAV GILDKVVLRW RRKRSGLRGF  900
RPEMETNENQ DEDILKVFRK QKVDVEIEEA VSRVLSMVKS PDARQQYHRM LEKFRQAKAE  960
LLASTSEEKL LSTSVEDYLN MEDDYYQYP
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved together with CAMTA2 and CAMTA3 in the positive regulation of a general stress response (PubMed:25039701). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:25039701, ECO:0000305|PubMed:11925432}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004504404.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By heat shock, UVB, salt, wounding, ethylene, methyl jasmonate, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by cold stress (PubMed:28351986). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:28351986}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004504404.10.0calmodulin-binding transcription activator 4 isoform X3
SwissprotQ9FYG20.0CMTA4_ARATH; Calmodulin-binding transcription activator 4
TrEMBLA0A1S2YHB30.0A0A1S2YHB3_CICAR; calmodulin-binding transcription activator 4 isoform X3
STRINGXP_004504403.10.0(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.10.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains
Publications ? help Back to Top
  1. Benn G, et al.
    A key general stress response motif is regulated non-uniformly by CAMTA transcription factors.
    Plant J., 2014. 80(1): p. 82-92
    [PMID:25039701]
  2. Kidokoro S, et al.
    Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature.
    Plant Cell, 2017. 29(4): p. 760-774
    [PMID:28351986]