PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_004504403.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family | CAMTA | ||||||||
Protein Properties | Length: 993aa MW: 110786 Da PI: 6.134 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 175.9 | 5.3e-55 | 13 | 129 | 2 | 117 |
CG-1 2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 ++e ++rwlk+ e++ iL+n+ek+++t+e++++p+sgsl+L+nr+++r+fr+DG+ w+kk+dg++v E+he+LKvg+ve+l+cyYah+e+ ptfq XP_004504403.1 13 YQEaQRRWLKPAEVMYILQNHEKYQFTQEPPQQPTSGSLFLFNRRVLRFFRRDGHAWRKKRDGRAVGEAHERLKVGNVEALNCYYAHGEQIPTFQ 107 566699***************************************************************************************** PP CG-1 96 rrcywlLeeelekivlvhylev 117 rr+yw+L+ ++++ivlvhy+++ XP_004504403.1 108 RRSYWMLDPAFDHIVLVHYRDT 129 *******************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51437 | 79.692 | 9 | 135 | IPR005559 | CG-1 DNA-binding domain |
SMART | SM01076 | 3.6E-76 | 12 | 130 | IPR005559 | CG-1 DNA-binding domain |
Pfam | PF03859 | 2.6E-47 | 15 | 128 | IPR005559 | CG-1 DNA-binding domain |
Gene3D | G3DSA:2.60.40.10 | 4.8E-9 | 424 | 515 | IPR013783 | Immunoglobulin-like fold |
CDD | cd00102 | 9.07E-6 | 430 | 515 | No hit | No description |
Pfam | PF01833 | 4.5E-8 | 430 | 513 | IPR002909 | IPT domain |
SuperFamily | SSF81296 | 9.8E-18 | 430 | 514 | IPR014756 | Immunoglobulin E-set |
Gene3D | G3DSA:1.25.40.20 | 4.7E-15 | 624 | 720 | IPR020683 | Ankyrin repeat-containing domain |
PROSITE profile | PS50297 | 14.955 | 626 | 718 | IPR020683 | Ankyrin repeat-containing domain |
SuperFamily | SSF48403 | 6.53E-16 | 628 | 720 | IPR020683 | Ankyrin repeat-containing domain |
CDD | cd00204 | 8.54E-13 | 631 | 718 | No hit | No description |
Pfam | PF12796 | 3.0E-7 | 641 | 719 | IPR020683 | Ankyrin repeat-containing domain |
SMART | SM00248 | 0.0038 | 659 | 688 | IPR002110 | Ankyrin repeat |
PROSITE profile | PS50088 | 11.06 | 659 | 691 | IPR002110 | Ankyrin repeat |
SMART | SM00015 | 100 | 776 | 798 | IPR000048 | IQ motif, EF-hand binding site |
SuperFamily | SSF52540 | 2.66E-8 | 777 | 882 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
PROSITE profile | PS50096 | 6.961 | 777 | 806 | IPR000048 | IQ motif, EF-hand binding site |
SMART | SM00015 | 0.18 | 834 | 856 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 8.224 | 836 | 864 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 0.0047 | 837 | 855 | IPR000048 | IQ motif, EF-hand binding site |
SMART | SM00015 | 4.2E-4 | 857 | 879 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 9.359 | 858 | 883 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 3.0E-5 | 860 | 879 | IPR000048 | IQ motif, EF-hand binding site |
SMART | SM00248 | 2200 | 902 | 931 | IPR002110 | Ankyrin repeat |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005829 | Cellular Component | cytosol | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 993 aa Download sequence Send to blast |
MASGYEYDIN DLYQEAQRRW LKPAEVMYIL QNHEKYQFTQ EPPQQPTSGS LFLFNRRVLR 60 FFRRDGHAWR KKRDGRAVGE AHERLKVGNV EALNCYYAHG EQIPTFQRRS YWMLDPAFDH 120 IVLVHYRDTS EGRLSSGPGT QLSPGSSSAF SQSPSSYSNQ NPGSTSIVDD SYERNQSFSS 180 PGSAEVTSDI FILNNGMAHL EGADAESGTS TELKITQALR RLEVQLSLNE DNFEEIAPFS 240 NEDEATRDSK PQNHQGVICK QEKSEALSGP DDQGQFCDGY NARQVVFVGD SGQSYREFLD 300 HDFPDGNEKV LSWTELKKLN KFSSVASPQK NVYMPAGNQD GSPSVSIREP VTSPENCCWT 360 NFNTNINNAG NSVFSLPQDV GGVTLPPYSS MVETREIHSG YYATLFDQSQ IGASLEAGSS 420 LTVSQKQKFT IKAVSPEWGY ASETTKVFII GSFLCHPSDS AWACMLGDVE VPVEMIQDGV 480 MCCEVPSHIP GKVTLCITSG NRESCSEVRE FEYRDKTKSC THCTPSETEA TRTPEELLLL 540 VRFGQMLLSA SSVSNDNNNE SGIIIKQKAD DDSWSHIIEA LLFGSGTSFG TINWLLEELL 600 KDKLQLWLTC RPWEADEETG CSLTKKEQGI IHMVAGLGFE WALNPILSCG VNINFRDING 660 WTALHWAARF GREKMVASLI ASGASAGAVT DPSAQDPIGK TAAAIASSSG HKGLAGYLSE 720 VALTSHLSSL KLEESELSKS SAELQADLTV SNVSKENIAS SEDPTSLKDT LAAIRNTTQA 780 AARIQAAFRT HSFRKRRANE AVAGMSRHDI SASSIGNMPE LSAMSKLAFR NPREFNSAAL 840 SIQKKYRGWK SRRDFLSLRQ KVVKIQAHVR GYQVRKHYKV LWAVGILDKV VLRWRRKRSG 900 LRGFRPEMET NENQDEDILK VFRKQKVDVE IEEAVSRVLS MVKSPDARQQ YHRMLEKFRQ 960 AKAELLASTS EEKLLSTSVE DYLNMEDDYY QYP |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved together with CAMTA2 and CAMTA3 in the positive regulation of a general stress response (PubMed:25039701). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:25039701, ECO:0000305|PubMed:11925432}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_004504403.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By heat shock, UVB, salt, wounding, ethylene, methyl jasmonate, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by cold stress (PubMed:28351986). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:28351986}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004504403.1 | 0.0 | calmodulin-binding transcription activator 4 isoform X1 | ||||
Swissprot | Q9FYG2 | 0.0 | CMTA4_ARATH; Calmodulin-binding transcription activator 4 | ||||
TrEMBL | A0A1S2YGC3 | 0.0 | A0A1S2YGC3_CICAR; calmodulin-binding transcription activator 4 isoform X1 | ||||
STRING | XP_004504403.1 | 0.0 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4548 | 29 | 50 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67310.1 | 0.0 | Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains |
Publications ? help Back to Top | |||
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