PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_004504054.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family | EIL | ||||||||
Protein Properties | Length: 460aa MW: 53275.1 Da PI: 5.1323 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 391.4 | 1.2e-119 | 23 | 352 | 2 | 353 |
XXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 2 elkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWk 96 lkkrmwkd++ll++lke+ k++ +++ + e++rrkkmsraQD+iLkYM+k+m +c+a+GfvYgi+pekgkpv+g+s+sLr+WWk XP_004504054.1 23 QLKKRMWKDKILLQKLKEKGKKE--ENQ--------QAKDEASRRKKMSRAQDSILKYMMKIMTICKAKGFVYGIVPEKGKPVTGSSESLREWWK 107 69************999998862..222........23479****************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT.--TT- CS EIN3 97 ekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelg.lskdq 190 e+v+f +n+paa+sky l+ ++++ l+ ++ s+ h l +lqDTtlgSLLsalmqhc ppqrrfple+g++pPWWP+G+e+wwg++g l++++ XP_004504054.1 108 EQVKFSQNAPAAVSKYL--PLLEENHELLELDPISYMHLLYDLQDTTLGSLLSALMQHCVPPQRRFPLERGLAPPWWPNGTEQWWGQQGlLAQEH 200 ****************4..47777777779***********************************************************999999 PP -.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 191 gtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahssslrkqspkvtlsceqkedve 285 g+ppykkphdlkkawkvsvL+a ikh+sp+++++r+l+ qsk lqdkm+ak+s+++++v+nqee++++ ++ +++s++++ ++ XP_004504054.1 201 GPPPYKKPHDLKKAWKVSVLAAIIKHLSPNVDKVRKLVTQSKTLQDKMTAKDSATWCKVMNQEEALIQ----------LTNRCLKISEHDDGKNQ 285 9***************************************************************9883..........36778999999999*** PP XXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS EIN3 286 gkkeskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353 g++ s+ ++++ ++ ++ ++krk++++ + ++ + q s++++se ++f++k+s+ ++e XP_004504054.1 286 GESSSSSSSIHVLNELVECGSNEKRKSEFDLDVDFDFEK-LYSYQYSECPQSELCMGFTNKSSRVNHE 352 ******99999999999**********999999999887.5***********************9986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 1.1E-111 | 23 | 264 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 2.2E-66 | 140 | 268 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 2.75E-57 | 142 | 267 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0080167 | Biological Process | response to karrikin | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 460 aa Download sequence Send to blast |
MVKITEEIDP FDQEEEEEID YDQLKKRMWK DKILLQKLKE KGKKEENQQA KDEASRRKKM 60 SRAQDSILKY MMKIMTICKA KGFVYGIVPE KGKPVTGSSE SLREWWKEQV KFSQNAPAAV 120 SKYLPLLEEN HELLELDPIS YMHLLYDLQD TTLGSLLSAL MQHCVPPQRR FPLERGLAPP 180 WWPNGTEQWW GQQGLLAQEH GPPPYKKPHD LKKAWKVSVL AAIIKHLSPN VDKVRKLVTQ 240 SKTLQDKMTA KDSATWCKVM NQEEALIQLT NRCLKISEHD DGKNQGESSS SSSSIHVLNE 300 LVECGSNEKR KSEFDLDVDF DFEKLYSYQY SECPQSELCM GFTNKSSRVN HESLCAYRTE 360 QEHVPFQDYL SDDWMNMDIT GADNQKHDHS NIVGNVNELG EIVERTVEDY GGFWIHGMQQ 420 DLELHMGVDM KRDNVDLNQN PEQETTLSHE ETSIWDLTYN |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 2e-59 | 140 | 268 | 1 | 128 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 2e-59 | 140 | 268 | 1 | 128 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_004504054.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004504054.1 | 0.0 | putative ETHYLENE INSENSITIVE 3-like 4 protein | ||||
Swissprot | Q9LX16 | 1e-136 | EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein | ||||
TrEMBL | A0A1S2YFI0 | 0.0 | A0A1S2YFI0_CICAR; putative ETHYLENE INSENSITIVE 3-like 4 protein | ||||
STRING | XP_004504054.1 | 0.0 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF322 | 34 | 200 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10120.1 | 1e-126 | EIL family protein |
Publications ? help Back to Top | |||
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