PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004502931.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family NAC
Protein Properties Length: 354aa    MW: 39506.2 Da    PI: 4.8005
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004502931.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM154.45.1e-4861341129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     l pGfrFhPtd elv+++Lk+kv g+k++  +vi+e+diyk+ PwdLp k  +k+++ +wyfFs++ kky+tg r nrat+ gyWk+tgkd+++ 
  XP_004502931.1   6 LIPGFRFHPTDVELVMYFLKRKVMGRKFPY-DVIAELDIYKYAPWDLPdKsLLKSGDLKWYFFSPTGKKYSTGGRMNRATEIGYWKTTGKDRSIE 99 
                     579***************************.99**************96446677888************************************* PP

             NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrle 129
                     + k+++vg+ +tLvf++g+++kg +tdWvmhe+rle
  XP_004502931.1 100 H-KNQVVGMIRTLVFHTGKSHKGDRTDWVMHEFRLE 134
                     9.999****************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.71E-574156IPR003441NAC domain
PROSITE profilePS5100553.3196156IPR003441NAC domain
PfamPF023651.5E-248133IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    Send to blast
MAETKLIPGF RFHPTDVELV MYFLKRKVMG RKFPYDVIAE LDIYKYAPWD LPDKSLLKSG  60
DLKWYFFSPT GKKYSTGGRM NRATEIGYWK TTGKDRSIEH KNQVVGMIRT LVFHTGKSHK  120
GDRTDWVMHE FRLEDKYLTD KGIPQNSYVI CRVFQKEGPG PRNGAQYGKP FNEKDWDSEE  180
EVDCPQPVPV AAVSAPAPIL PSSCHISVAN DMHPTTSGCI GLASSSYLSR VMPSGVTHPS  240
APSNQVDDDI LSMLASFKDD NDTSAKNENN GSEKVDNSGQ ANNAEGAPYL DPNEIFESLG  300
DLDSLIGLDE GDGFSYGQKD EYTKNEMPST SNVSLFCDPQ HDFLELTDLE APLF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A9e-45215711169Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004502931.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCU0120501e-106CU012050.16 M.truncatula DNA sequence from clone MTH2-31E18 on chromosome 3, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004502931.10.0NAC domain-containing protein 82 isoform X1
TrEMBLA0A1S2YE670.0A0A1S2YE67_CICAR; NAC domain-containing protein 82 isoform X1
STRINGXP_004502931.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33023465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09330.46e-89NAC domain containing protein 82