PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_004502688.1

Organism

Cicer arietinum

Taxonomic ID

3827

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer

Family

Dof

Protein Properties

Length: 298aa MW: 32405.4 Da PI: 5.6694

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_004502688.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	44.7	2.9e-14	41	67	36	61
zf-Dof 36 C.rryWtkGGalrnvPvGggrrknkks 61 C rryWt+GG+lrnvPvGgg+rknk+s XP_004502688.1 41 CpRRYWTEGGSLRNVPVGGGSRKNKRS 67 549**********************87 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	4.0E-9	31	66	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	6.4E-9	41	66	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence Send to blast
MDTSQWAQGI GVVKQMENPC SKEAPMLERR ARPQKDQALN CPRRYWTEGG SLRNVPVGGG 60 SRKNKRSTPS SPSPSSSQIP SSTITKNIIL NNHDLASQNN NTNFPHSASQ NPKIHQGQDL 120 NLAYPPPQED YNTLSKFIEL PYEQDKPNTT TTTNNNNNNN SSSSPSSHLS AMELLKTGIV 180 NSSSSSRGLN STNFMMPMSI SESSAAAAAM YNSTGFANLQ DFKPGLNFSV VEGFENGYGG 240 LEGIEESGSG ARMLFPVEEM KQQVPSSDHE FDEQNNINTR NQGDSSGFWN GMLGGGSW

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_004502688.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004502688.1	0.0	dof zinc finger protein DOF4.6-like isoform X2
TrEMBL	A0A1S2YC89	0.0	A0A1S2YC89_CICAR; dof zinc finger protein DOF4.6-like isoform X2
STRING	XP_004502687.1	1e-172	(Cicer arietinum)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24060.1	9e-18	Dof family protein