PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004499492.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family C2H2
Protein Properties Length: 487aa    MW: 55614.6 Da    PI: 8.185
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004499492.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.90.0014105123321
                     ETTTTEEESSHHHHHHHHH CS
         zf-C2H2   3 CpdCgksFsrksnLkrHir 21 
                     C++Cgk F ++  L  H++
  XP_004499492.1 105 CEKCGKGFQSWKALFGHMK 123
                     ******************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139121.0E-41136IPR007087Zinc finger, C2H2
PROSITE profilePS501579.5151240IPR007087Zinc finger, C2H2
SMARTSM003552.51234IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002801435IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.263103130IPR007087Zinc finger, C2H2
SMARTSM003550.13103125IPR015880Zinc finger, C2H2-like
SuperFamilySSF576679.83E-8104125No hitNo description
PfamPF139121.3E-5105127IPR007087Zinc finger, C2H2
PROSITE patternPS000280105125IPR007087Zinc finger, C2H2
SuperFamilySSF576679.83E-8367394No hitNo description
SMARTSM003550.098372394IPR015880Zinc finger, C2H2-like
PfamPF139123.6E-11372396IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.554372399IPR007087Zinc finger, C2H2
PROSITE patternPS000280374394IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 487 aa     Download sequence    Send to blast
MEFEKDQEVI THVCKFCSKS FSCGRSLGGH MRCHHDHVKI NDHDHDHDEI DAATTTKVKK  60
EEGCCSEGYY GLRENPKKTW RVLTDSSNDH EQDPFIVDVV LDKLCEKCGK GFQSWKALFG  120
HMKCHSEKER VSSSSKKNKN ISFELDEQED SSCVQKKMVL DSVSDDNEAT VPNRRRRSKR  180
KLRTRYMNMN SSSSSSSCFV ENSVCEIDEH EQKEVAMSLM MLSRDVRSWC GLNSIAESSD  240
NNNNNSLELE APLTHLVSKI EGKKRVITNG SEIVKMTKKE KNFEFGNLNS KGKKSSELFV  300
TMKKTKVSDI ENGKDKKKNK KKKIEVQVDS DSAFEVNAKS KSGNTTTKYT SMKEKFFDCE  360
LSKKKPHKRG KFECTTCNKI FNSYQALGGH RASHKKNKGC YFASKKIHSS ENENIAELEL  420
EMKNNLAAAD ERRMLQSEIH EEAPEIRDFL DLNVPAEATD EEKRGHGEAC YKPWWFVGSN  480
LKQEAMV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1174180RRRSKRK
2174181RRRSKRKL
3176182RSKRKLR
4312318GKDKKKN
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004499492.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004499492.10.0uncharacterized protein LOC101495666
TrEMBLA0A1S2Y6C00.0A0A1S2Y6C0_CICAR; uncharacterized protein LOC101495666
STRINGXP_004499492.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF11013080
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26610.13e-20C2H2-like zinc finger protein