PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004499395.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family NAC
Protein Properties Length: 394aa    MW: 44513.5 Da    PI: 4.9034
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004499395.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM93.34e-29561972128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkk....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tks 80 
                     p G++F+P+d el+ e+L++k+   +    + +ee+i++++    i++++P++Lp  +k++ ++++fF+++ ++y+tg+rk+r+         ++
  XP_004499395.1  56 PLGIKFDPSDVELL-EHLAAKCGVGNtkphMFIEEFIPTLEgnqgICYTHPENLP-GAKKDGSSVHFFHRTINAYSTGQRKRRKihhhrgltEEH 148
                     89************.999999876664555333344555433445**********.55677899*******************867777774448 PP

             NAM  81 gyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                      +W++tgk+k+v++ +g ++g kk++v+y  +++++k+ k++W mh+y+l
  XP_004499395.1 149 VRWHKTGKTKAVFE-DGVHKGFKKIMVLYirSEKESKSYKSNWKMHQYHL 197
                     89************.999***********7656788888*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.97E-3540216IPR003441NAC domain
PROSITE profilePS5100528.25755216IPR003441NAC domain
PfamPF023651.9E-1156197IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    Send to blast
MARSWLIDIG GFAKKVKSTT LSSADQIKDC GAYRECPNCH YRIDNSDVST EWPGFPLGIK  60
FDPSDVELLE HLAAKCGVGN TKPHMFIEEF IPTLEGNQGI CYTHPENLPG AKKDGSSVHF  120
FHRTINAYST GQRKRRKIHH HRGLTEEHVR WHKTGKTKAV FEDGVHKGFK KIMVLYIRSE  180
KESKSYKSNW KMHQYHLGIN EDEKNGEYVV SKIFYKQVEK NEEKPLAEEP DNVTSRTSPT  240
TPKPNPPNPP RTGICVENDD NIDETALLLF AEDAKSIPGE SHAPQSDIQD QENTPNPAWF  300
AGESQAIENS EYDGLDDILL CKEILDSFAL FDDSGLDSIT TNDFDYYENK MTGNGNVTST  360
SVLDTLELDT PPDFDLSNLT FCSQDSILDW MDRL
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004499395.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0980156e-51BT098015.1 Soybean clone JCVI-FLGm-26B21 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004499395.10.0SUPPRESSOR OF GAMMA RESPONSE 1
TrEMBLA0A1S2Y4U30.0A0A1S2Y4U3_CICAR; SUPPRESSOR OF GAMMA RESPONSE 1
STRINGXP_004499395.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF75723047
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01600.11e-92NAC domain containing protein 44