PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004499248.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family C2H2
Protein Properties Length: 410aa    MW: 45401.8 Da    PI: 9.2585
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004499248.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.80.00035176198223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                      C  Cg++F+  ++L+ H+ + H
  XP_004499248.1 176 ACDQCGEVFPKIESLELHQAVrH 198
                     69*****************9888 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280175198IPR007087Zinc finger, C2H2
PROSITE profilePS501578.767175203IPR007087Zinc finger, C2H2
SuperFamilySSF563991.15E-23200406No hitNo description
Gene3DG3DSA:3.90.228.101.0E-12202406IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    Send to blast
MKERTHFLSL LLPFYFLILF LMALLTSLPQ QSHPKHKHNK KQKPKATSSW DQIKNILTCK  60
QMEGSTVHDP SKANNNGYSK MGSTCRSICS LRDVVHGNTR VVHRSDNSSP ESSVLGQETS  120
LLKRKPSGKS NGGGNYTSSS STTSRGMQFR KLSGCYECHM IVDPTRLPIP RSTVCACDQC  180
GEVFPKIESL ELHQAVRHAV SELGPEDSGR NIVEIIFKSS WLKRESPMCK IERILKVHNT  240
QRTIQRFEEC RDTVKSRATN TTKKNPRCAA DGNELLRFHS ATLTCALGAR GSSSLCATVP  300
GCGVCTIIRH GFQNKGGVRT NASSGRAHDY SVERCEEEDS RRAMLVCRVI AGRVKRVAEE  360
GAPQLSEEEG VSYDSVAGYA GIYSNLEELT VFNPRAILPC FVVIYKVLSS
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004499248.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004499248.10.0uncharacterized protein LOC101513058
TrEMBLA0A1S2Y4H80.0A0A1S2Y4H8_CICAR; uncharacterized protein LOC101513058
STRINGXP_004499248.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF103413037
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-166C2H2-like zinc finger protein