PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004499204.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family TALE
Protein Properties Length: 612aa    MW: 67858.3 Da    PI: 5.4795
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004499204.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.82e-093884251954
                     HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                     Fe   ++yp+ +e+  LA+++gLt +qV +WF N R +
  XP_004499204.1 388 FEHflHPYPKDSEKIMLARQTGLTRNQVANWFINARVR 425
                     665559******************************88 PP
2BELL124.83.3e-40260330272
            BELL   2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                     rq l  kk+kLls+l+eVdkrY+qy++q+q+v+ssF++vag+g+a+pYt+lAl++iSrhFrcL+dai++qi
  XP_004499204.1 260 RQLLLDKKTKLLSMLDEVDKRYRQYCHQMQIVVSSFDMVAGCGAAEPYTALALRTISRHFRCLRDAISGQI 330
                     666778****************************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005749.9E-60177328IPR006563POX domain
PfamPF075266.1E-50183327IPR006563POX domain
PROSITE profilePS5007112.438366429IPR001356Homeobox domain
SMARTSM003891.6E-9369433IPR001356Homeobox domain
CDDcd000862.05E-12369430No hitNo description
SuperFamilySSF466892.01E-17370437IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.5E-28372435IPR009057Homeodomain-like
PfamPF059202.9E-17386425IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 612 aa     Download sequence    Send to blast
MYPNQAFSSG SYAEMMSANT LLPHNYNESV GGQNELKFIS SIGDTMTMQP IDHSTSDPSR  60
NSYASAEDSH VISRTQFGLV ESDQNVQCQG LSLSLGTMMP SIASVPAFQY QYPGNGFSAL  120
LSAQIPNLKG SSSLKDDEAE CMASLSSGGF HNTVKREGLY TIGLNEGQSD PCLHGSSSIP  180
NNVLNSHYVK AAQELLDEIV NVRKALKQSG FEKQQSLRDT GLDGSKDSDG KSTSQSMQIS  240
SGPNGSNANN SSSELSPAER QLLLDKKTKL LSMLDEVDKR YRQYCHQMQI VVSSFDMVAG  300
CGAAEPYTAL ALRTISRHFR CLRDAISGQI QATQRSLGEQ EGIPRLRYVD QQLRQQKALQ  360
QLGVMRQAWR PQRGLPESSV SILRAWLFEH FLHPYPKDSE KIMLARQTGL TRNQVANWFI  420
NARVRLWKPM VEEMYKEEFG DSESSSNLLS ENTPKAPRDD VQVSDNKREE SQDKLVTVDG  480
VQSSDHWTNV MDSRIEKMQG DQRFNMNNSP YSNAPISINQ NADNCIMDST PTTYDDLSEL  540
GNFAVGGHVS LALELRNSES DGFGVSNDDA NKRRNQALAS SPDTDLLDYH FADTGKQQHK  600
FGNTHLLHEF VV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrs_A3e-16375432158Homeobox protein Meis1
4xrs_B3e-16375432158Homeobox protein Meis1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004499204.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1595351e-134AC159535.12 Medicago truncatula clone mth2-152f22, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004499204.10.0BEL1-like homeodomain protein 7
RefseqXP_027189600.10.0BEL1-like homeodomain protein 7
TrEMBLA0A1S2Y6A50.0A0A1S2Y6A5_CICAR; BEL1-like homeodomain protein 7
STRINGXP_004499204.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF21463179
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16400.11e-100BEL1-like homeodomain 7