PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004498983.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 298aa    MW: 33093.3 Da    PI: 6.5912
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004498983.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.44.9e-2091140255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f tae Aa+a+++a++k++g
  XP_004498983.1  91 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFETAEAAARAYDEAALKFRG 140
                     7********.**********7.....337*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103225.72591148IPR001471AP2/ERF domain
PfamPF008477.1E-1491140IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-2391149IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.3E-3391149IPR001471AP2/ERF domain
SMARTSM003804.5E-3891154IPR001471AP2/ERF domain
PRINTSPR003678.6E-1292103IPR001471AP2/ERF domain
CDDcd000183.76E-1699150No hitNo description
PRINTSPR003678.6E-12114130IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
MSYPLVSAPT HDGLGQAQNE WVQVQQVGHK RVREDDFHKT REVAASSHHQ DFTSIHTNVA  60
DFRLPSSQGP SSSEARRRES NEEESGERRR RYRGVRQRPW GKWAAEIRDP HKAARVWLGT  120
FETAEAAARA YDEAALKFRG SRAKLNFPEN VTTTISPTFP PNTSSTVSVN PATHYSPPPP  180
LQMQQPPFTQ FQGSSDLLTD YYQYSQILKG SADFQGLEQW FYESQMAAIH SSSSMLLPST  240
AFSPATQLSS ASLPLFPGQQ IEFFRPPEDH SHGEDVGGGS GLPPSTWSDT SGYPPPSS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A6e-2492153668ATERF1
3gcc_A6e-2492153668ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17590RRRESNEEESGERRRR
28691ERRRRY
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004498983.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004498983.10.0ethylene-responsive transcription factor ERF110-like isoform X5
RefseqXP_027189820.10.0uncharacterized protein LOC101508871 isoform X2
TrEMBLA0A1S2Y4210.0A0A1S2Y421_CICAR; ethylene-responsive transcription factor ERF110-like isoform X5
TrEMBLA0A3Q7YF340.0A0A3Q7YF34_CICAR; uncharacterized protein LOC101508871 isoform X2
STRINGXP_004498981.11e-174(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43160.14e-20related to AP2 6