PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004498778.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 169aa    MW: 19069.6 Da    PI: 8.1053
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004498778.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.22e-18754253
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53
                    +++GVr+++ +g+Wv+eIr+p        +r++lg+f tae+Aa+a+++a++ +
  XP_004498778.1  7 RFRGVRQRH-WGSWVSEIRHP-----IlkTRIWLGTFETAEDAARAYDEAARLM 54
                    69******9.**********8.....556*********************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000189.64E-35664No hitNo description
Gene3DG3DSA:3.30.730.103.9E-33765IPR001471AP2/ERF domain
PfamPF008472.3E-11756IPR001471AP2/ERF domain
SMARTSM003804.2E-40770IPR001471AP2/ERF domain
PROSITE profilePS5103220.508764IPR001471AP2/ERF domain
SuperFamilySSF541712.62E-20765IPR016177DNA-binding domain
PRINTSPR003678.4E-11819IPR001471AP2/ERF domain
PRINTSPR003678.4E-113046IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    Send to blast
MARPQQRFRG VRQRHWGSWV SEIRHPILKT RIWLGTFETA EDAARAYDEA ARLMCGSRTR  60
TNFPLNSNVS SSKILSPTLT AKLHRCYVAS LQLTRKMLVV PPPTQNVMIS TTTSTNGKAL  120
ENGNSHELFK ALEEDDHQIE QMIEELLDYG SIELCSATHN TQESAGQTI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-18868667ATERF1
3gcc_A1e-18868667ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004498778.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004498778.11e-125ethylene-responsive transcription factor ERF003-like
SwissprotQ94AW51e-64ERF03_ARATH; Ethylene-responsive transcription factor ERF003
TrEMBLA0A1S2Y3G21e-124A0A1S2Y3G2_CICAR; ethylene-responsive transcription factor ERF003-like
STRINGXP_004498778.11e-125(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF110634110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.11e-55ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]