PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004498676.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bZIP
Protein Properties Length: 438aa    MW: 48588.5 Da    PI: 6.6806
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004498676.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.86.5e-10151186338
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeL 38 
                     + k  rr+++NReAAr+sR+RKka++++Le    ++
  XP_004498676.1 151 DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKF 186
                     568899************************854444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.7E-8145195No hitNo description
SMARTSM003382.4E-7149212IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.036151195IPR004827Basic-leucine zipper domain
CDDcd147085.65E-21153205No hitNo description
PfamPF001705.6E-7153191IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.04E-6153195No hitNo description
PROSITE patternPS000360156171IPR004827Basic-leucine zipper domain
PfamPF141449.6E-31235310IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 438 aa     Download sequence    Send to blast
MRREQQEGCR ASIHNCHIPM QEGGTVDSFH VSDFDQSVGY CLEDAVGLTG MISGRVARAG  60
GEASCGALQS PLTNDTQLQS LQVRKAQSSN LVTILIGNTE NQEEFAMAEG SPITDISTDG  120
DTDDKNQRFD RSRSLAAMAS DSGDRSKNKS DQKTLRRLAQ NREAARKSRL RKKAYVQQLE  180
SSRLKFTQLE QELQRARQQG IFISSSGDQA HSMSGNGAMA FDVEYARWLE EQNRQINELR  240
GAVNSHASET ELHMIMDGIL AHYDEIFRLK GIAAKADVFH LLSGMWKTPA ERCFLWLGGF  300
RSSELLKLLI NQLEPLTDQQ LVGITNLQQS SQEAEDALSQ GMEALQQSLS ETLTTGPLGS  360
SSSSGNVANY MGQMAMAMGK LGTLEGFIRQ ADNLRQQTLQ QIHRILTTRQ SARALLAIHD  420
YFSRLRALSS LWLARPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004498676.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0933150.0BT093315.1 Soybean clone JCVI-FLGm-24E7 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004498676.10.0transcription factor TGA2.2 isoform X1
RefseqXP_012570692.10.0transcription factor TGA2.2 isoform X1
SwissprotQ6IVC20.0TGAL1_ORYSJ; Transcription factor TGAL1
TrEMBLA0A1S3E4H00.0A0A1S3E4H0_CICAR; transcription factor TGA2.2 isoform X1
STRINGXP_004498676.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14703494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.51e-149TGACG motif-binding factor 6
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]