PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004498054.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family C2H2
Protein Properties Length: 271aa    MW: 30774.1 Da    PI: 10.076
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004498054.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.80.000363456123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    + C  CgksFs+   L  H  +H
  XP_004498054.1 34 FICDLCGKSFSSGNALGGHKASH 56
                    89*********999998888777 PP
2zf-C2H214.69.7e-0591113123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     + C  C+k+F+++  L  H+r+H
  XP_004498054.1  91 HACVLCHKVFPSNKVLYGHMRSH 113
                     67********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576678.83E-73256No hitNo description
SMARTSM003550.13456IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.8243461IPR007087Zinc finger, C2H2
PfamPF139124.0E-113457IPR007087Zinc finger, C2H2
PROSITE patternPS0002803656IPR007087Zinc finger, C2H2
SuperFamilySSF576678.83E-786113No hitNo description
PROSITE profilePS5015710.20191118IPR007087Zinc finger, C2H2
SMARTSM003550.07591113IPR015880Zinc finger, C2H2-like
PfamPF139121.3E-591115IPR007087Zinc finger, C2H2
PROSITE patternPS00028093113IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MKRSCQSFDK PMKNDDFVWP LLANEMKKNG SRIFICDLCG KSFSSGNALG GHKASHNRSN  60
LLQPPIKKHK LTIDSCSLSS PHDHDDVKHK HACVLCHKVF PSNKVLYGHM RSHSQKDSKA  120
IQPPPITTTS PDSKKQSNNT HDQPILPTID LEKYFPPRSH QTKKRRSKSI IDYELINVAQ  180
ILCDMSRSDP KRLKLSTNID NQKNKEHVTI VKNNNNEKKL VVRFKIPKDK EVKNNEGETK  240
KESSHQLGSR GVVKDFDLNE IPVDVADEQA N
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1162167KKRRSK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004498054.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004498054.20.0uncharacterized protein LOC101499993
TrEMBLA0A1S2Y1Z90.0A0A1S2Y1Z9_CICAR; uncharacterized protein LOC101499993
STRINGXP_004498054.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15177311
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28710.11e-12C2H2 family protein