PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004497948.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family C2H2
Protein Properties Length: 190aa    MW: 21595.3 Da    PI: 8.7998
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004497948.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.72e-055779123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C+k Fs++  L  H++ H
  XP_004497948.1 57 YPCKFCNKKFSSSQALGGHQNAH 79
                    99******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576677.77E-75684No hitNo description
Gene3DG3DSA:3.30.160.603.0E-55783IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PfamPF139123.9E-65781IPR007087Zinc finger, C2H2
PROSITE profilePS5015711.7395784IPR007087Zinc finger, C2H2
PROSITE patternPS0002805979IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    Send to blast
MQFVNGDKKR NLKRKMEETT TLSSTIDSEV SLSLSLGIGI SYSPFKFLKS NEENIEYPCK  60
FCNKKFSSSQ ALGGHQNAHR RERVISKIEK EFQMGTFGLL GPHQLCSYSP ILNHHQYAVG  120
SPFFHHQMHY PNVAPSWTQF VAPIGYANPF GMMNNSLGTP TTPQNNNDNI HYVDDNRQIS  180
SSFPHLFLNH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1815KRNLKRKM
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004497948.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004497948.11e-142zinc finger protein 7-like
TrEMBLA0A1S2Y1S91e-140A0A1S2Y1S9_CICAR; zinc finger protein 7-like
STRINGXP_004497948.11e-141(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF142291217
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05120.19e-12C2H2 family protein