PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_004497619.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family | ERF | ||||||||
Protein Properties | Length: 193aa MW: 22004 Da PI: 7.9845 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 46.2 | 1.1e-14 | 19 | 68 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 ykGVr++ +g+Wv+e+r p n+ ++r++lg+f +++Aa a++ a+++++ge XP_004497619.2 19 IYKGVRQR--NGKWVCELRQP--NN-KTRIWLGTFSHPDMAAIAYDVAALAFKGE 68 69***975..6******9998..33.6***********************99986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 2.11E-27 | 18 | 77 | No hit | No description |
Pfam | PF00847 | 1.4E-9 | 18 | 68 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.97E-18 | 19 | 76 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 18.531 | 19 | 75 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 6.2E-28 | 19 | 81 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.4E-26 | 19 | 76 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.1E-6 | 20 | 31 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.1E-6 | 57 | 77 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence Send to blast |
MMEKRRGGRK KFHETRHPIY KGVRQRNGKW VCELRQPNNK TRIWLGTFSH PDMAAIAYDV 60 AALAFKGESA SLNFPHAATS LPRLNSRTSS IRSIQFAAMK AAKNHFFTCQ DSEPFLTEIV 120 RNDSESVDCQ LNVCLVKSLE DSRSFFWDED EIFNMPGLIN SMAEGLIITP PALQRGFNWV 180 DGESTMDLTL WES |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_004497619.2 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004497619.2 | 1e-145 | dehydration-responsive element-binding protein 1B-like | ||||
TrEMBL | A0A1S2Y2V0 | 1e-144 | A0A1S2Y2V0_CICAR; dehydration-responsive element-binding protein 1B-like | ||||
STRING | XP_004497619.1 | 1e-143 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF243 | 33 | 224 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25470.1 | 1e-46 | C-repeat/DRE binding factor 2 |