PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004496639.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 190aa    MW: 21444.8 Da    PI: 8.1325
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004496639.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH231.4e-072369654
                    HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH  6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                     e+E++RR ++    + Lr+ lP+ +    ++K s ++   +A +YI +L
  XP_004496639.1 23 REVEKQRRMEMSILCSSLRSSLPShL---IKGKRSVSDHINEAANYIEDL 69
                    699*********************88...******************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.54E-111490IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.25E-51773No hitNo description
PROSITE profilePS5088810.7341769IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.0E-72291IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.8E-42369IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    Send to blast
MAKENQHIIL APSGNDEKKI IRREVEKQRR MEMSILCSSL RSSLPSHLIK GKRSVSDHIN  60
EAANYIEDLK KKINRLEIKR DKLKMKSSMV ESGNELSGDI RNSSVVKCVK MNVIRDGVEI  120
VICSGFHDCS SSSPLSDLME IIVEEGCDVV NCVTNQVNGK TFHTIKSEVE DMTRLDLARL  180
QNKLDYAILL
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004496639.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004496639.11e-135transcription factor bHLH36-like
RefseqXP_012570134.11e-135transcription factor bHLH36-like
TrEMBLA0A1S3E4391e-133A0A1S3E439_CICAR; transcription factor bHLH36-like
STRINGXP_004496639.11e-134(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF79233125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51780.11e-30bHLH family protein