PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004496613.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 213aa    MW: 23160.5 Da    PI: 4.7286
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004496613.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.54.4e-153885355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    y+G r ++ +g+Wv+eIr+p++   +kr++lg++ t e+Aa+a++ a+++l+g
  XP_004496613.1 38 YRGTR-CR-SGKWVSEIREPRK---TKRIWLGTYPTSEMAAAAYDVAALALKG 85
                    55555.44.588*******843...5************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.7E-103585IPR001471AP2/ERF domain
SMARTSM003806.2E-263799IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-243794IPR001471AP2/ERF domain
PROSITE profilePS5103219.9543793IPR001471AP2/ERF domain
CDDcd000185.21E-153795No hitNo description
SuperFamilySSF541716.54E-183895IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    Send to blast
MDGKPYPPPA VLPCIEVSSN SSPTPSASAS SSSPSVRYRG TRCRSGKWVS EIREPRKTKR  60
IWLGTYPTSE MAAAAYDVAA LALKGPDTFL NFPNSILSYP IPASMSPTDI RAAAEAAAQA  120
RIVNVIRSSQ SQQEEKEKEN PSCFEGSNSD SGHQQQYIDE DELLNMPNLL DDMARGMQVS  180
PPRITSFSNY SDHDNSPSNS DSGGGDNLWS YTF
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004496613.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004496613.11e-157ethylene-responsive transcription factor ERF027-like
SwissprotQ9FJ908e-43ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLA0A1S2XYR81e-155A0A1S2XYR8_CICAR; ethylene-responsive transcription factor ERF027-like
STRINGXP_004496613.11e-156(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.15e-31ERF family protein
Publications ? help Back to Top
  1. Li B, et al.
    Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.
    Plant Cell, 2018. 30(1): p. 178-195
    [PMID:29317470]