PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004495935.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 302aa    MW: 34712.6 Da    PI: 5.0395
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004495935.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15.3e-1979127355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a+++ ++k++g
  XP_004495935.1  79 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDREARKIRG 127
                     9*******.**********954...4************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103223.77578135IPR001471AP2/ERF domain
SuperFamilySSF541712.42E-2278136IPR016177DNA-binding domain
SMARTSM003801.4E-3878141IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.4E-3278136IPR001471AP2/ERF domain
PfamPF008476.1E-1279127IPR001471AP2/ERF domain
PRINTSPR003677.7E-127990IPR001471AP2/ERF domain
CDDcd000182.77E-3379137No hitNo description
PRINTSPR003677.7E-12101117IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008219Biological Processcell death
GO:0009723Biological Processresponse to ethylene
GO:0009735Biological Processresponse to cytokinin
GO:0009753Biological Processresponse to jasmonic acid
GO:0010286Biological Processheat acclimation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0051707Biological Processresponse to other organism
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0005886Cellular Componentplasma membrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MCGGAIIADF IPRRGGRRLT ASELWPSSFG QQKDSDFDFS QTGGDQQTPP PPPTLKRSYT  60
PTVSEQVEKP VKKQRKNLYR GIRQRPWGKW AAEIRDPRKG VRVWLGTFNT AEEAARAYDR  120
EARKIRGKKA KVNFPNDDDD YSSSIKVRRY NNPPIKPPII PLYQQQQYPK NLNLEFGYDL  180
NQTDTVHSHV GAINTDSFII SGSDETSEVG NGYLTMEFNQ NENGYFVGVV NGNEKEKEKE  240
KEREIEQQEQ EAAKNEVQEL SDELMAYEDY MKFYQIPYYD GQFMPPPNIV QESVVGDLWS  300
FD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A4e-2279135360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00109PBMTransfer from AT3G16770Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004495935.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB3786382e-71AB378638.1 Lotus japonicus LjERF19 mRNA for transcription factor AP2-EREBP, complete cds.
GenBankKJ0047282e-71KJ004728.1 Lotus corniculatus cultivar Leo AP2/ERF (ERF054) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004495935.10.0ethylene-responsive transcription factor ERF073-like
TrEMBLA0A1S2XX700.0A0A1S2XX70_CICAR; ethylene-responsive transcription factor ERF073-like
STRINGXP_004495935.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67713449
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.14e-35ethylene-responsive element binding protein