PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_004494908.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family | ERF | ||||||||
Protein Properties | Length: 205aa MW: 22517.8 Da PI: 4.6322 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.4 | 3.7e-18 | 28 | 77 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr++ +g+Wv+eIr+p+ + r++lg+f t+e+Aa a++ a+++l+g XP_004494908.1 28 LYRGVRRRN-SGKWVSEIREPK----KpNRIWLGTFPTPEMAAIAYDVAALALKG 77 69****888.8*********94....468***********************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PIRSF | PIRSF038123 | 4.2E-23 | 1 | 199 | IPR017392 | AP2/ERF transcription factor ERF/PTI6 |
CDD | cd00018 | 3.89E-32 | 27 | 87 | No hit | No description |
Pfam | PF00847 | 4.2E-11 | 27 | 77 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 6.34E-21 | 28 | 86 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 9.9E-35 | 28 | 91 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 3.6E-30 | 28 | 87 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 22.721 | 28 | 85 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.6E-11 | 29 | 40 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.6E-11 | 67 | 87 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0050832 | Biological Process | defense response to fungus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence Send to blast |
MPENYTADHA SSSSSSSSTK VSTGRHPLYR GVRRRNSGKW VSEIREPKKP NRIWLGTFPT 60 PEMAAIAYDV AALALKGKNA ELNFPNSSSS LPVPASSSAR DIQLAAASAA AAVGAAKDAL 120 ATEGNHAVEL QDFFSSGNEN NNNNNNINEF IDEDLIFDMP NVLVNMAEGM LISPPRFDHF 180 ETDYHYDVQE NMCDDPNLWS YPYFP |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 4e-15 | 26 | 86 | 12 | 73 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_004494908.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004494908.1 | 1e-151 | ethylene-responsive transcription factor ERF024 | ||||
Swissprot | Q9SJR0 | 1e-58 | ERF24_ARATH; Ethylene-responsive transcription factor ERF024 | ||||
TrEMBL | A0A1S2XUY3 | 1e-150 | A0A1S2XUY3_CICAR; ethylene-responsive transcription factor ERF024 | ||||
STRING | XP_004494908.1 | 1e-150 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF562 | 32 | 144 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36450.1 | 6e-40 | ERF family protein |