PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004493572.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family G2-like
Protein Properties Length: 388aa    MW: 43993.2 Da    PI: 6.8427
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004493572.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.89.1e-32213267155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     k+r+rWt++LHe+Fv++v+ LGG+ekAtPk++l++m+ +gLt++hvkSHLQkYR+
  XP_004493572.1 213 KTRIRWTKDLHEKFVKCVNLLGGAEKATPKAVLKMMDSDGLTIYHVKSHLQKYRI 267
                     68****************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512949.972210270IPR017930Myb domain
SuperFamilySSF466891.24E-16211267IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.2E-28211268IPR009057Homeodomain-like
TIGRFAMsTIGR015572.5E-22213268IPR006447Myb domain, plants
PfamPF002498.2E-9217266IPR001005SANT/Myb domain
PfamPF143793.8E-20297344IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    Send to blast
MSQVWNLGTC SQQQKLSIVG EEESKSSNTS TIMSRFESPT SAFYATENYM GFAEFDNQSL  60
SSQLYKINDF DFPLYQSLRE NNHFLDSSNQ HDPNFELSNT LQALVKSQLN GNQCLRFQEK  120
SNKFSCENFP GSKFIPIEQQ KLFLGGLASV GSSSSFCNKG NQSYMDACGS YDLSVEQLNF  180
SSHHEKLSQT ISSESLSTSL GNPSSNENVV SSKTRIRWTK DLHEKFVKCV NLLGGAEKAT  240
PKAVLKMMDS DGLTIYHVKS HLQKYRIAKF MPESTQGKSD KRVRTEDMDH IGVKTGFQIK  300
EALQLQLDAQ RRLHEQLEIQ RTLQLRIEEQ GRELKKMFEQ QQKTCNNLFK TPNKVNDDTK  360
INHLEDVEVS ICEGAENSLF TSKTSLNT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A9e-23213270259Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B9e-23213270259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A9e-23213270259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C9e-23213270259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D9e-23213270259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F9e-23213270259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H9e-23213270259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J9e-23213270259Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004493572.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004493572.10.0protein PHOSPHATE STARVATION RESPONSE 3-like
TrEMBLA0A1S2XRU80.0A0A1S2XRU8_CICAR; protein PHOSPHATE STARVATION RESPONSE 3-like
STRINGXP_004493572.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37403465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.13e-59G2-like family protein