PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004493570.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family G2-like
Protein Properties Length: 337aa    MW: 39376.3 Da    PI: 7.3966
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004493570.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like77.51.7e-24205259155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     k r+rWt+eLHe F+  v++LGG+e+A Pk+il++m+ + L+++h+kSHLQk R+
  XP_004493570.1 205 KRRVRWTKELHEPFMMIVNHLGGPERAKPKAILDMMNSDLLSISHIKSHLQKCRS 259
                     68**************************************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512949.384202262IPR017930Myb domain
SuperFamilySSF466891.04E-12203260IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.7E-22203261IPR009057Homeodomain-like
TIGRFAMsTIGR015574.6E-19205259IPR006447Myb domain, plants
PfamPF002491.8E-5207257IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MYQHWSRMFG TQWESYMGIN NLVKVVESEQ VNFEPIKSSP CNNIVTTTNL QTPHVSFQAT  60
EEYYDEDQIE VPDWSCFEFP KITDPPMLIC QTSGDNFNSD QITNSLYSVD ESLLSNSSDS  120
HCSEEEYSNF QSGNNITFYD HFPHKHDELL RSDASKDERP LEISFQRSKS WRGSCTKSEK  180
QSPQLYGIAC VTSSNSSTRK VHKSKRRVRW TKELHEPFMM IVNHLGGPER AKPKAILDMM  240
NSDLLSISHI KSHLQKCRST TRFHKPLQEK SEEGHRIDGV TELQHKISQM QIEESRQLQI  300
EIRKSISQQL KMQRNLQTLI EQERKKLKLM LDIQRKR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A3e-14205263259Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B3e-14205263259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A3e-14205263259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C3e-14205263259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D3e-14205263259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F3e-14205263259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H3e-14205263259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J3e-14205263259Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004493570.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004493570.10.0protein PHOSPHATE STARVATION RESPONSE 1-like isoform X1
TrEMBLA0A1S2XRV40.0A0A1S2XRV4_CICAR; protein PHOSPHATE STARVATION RESPONSE 1-like isoform X1
STRINGXP_004493570.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF144901016
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.16e-28G2-like family protein