PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004493506.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family C2H2
Protein Properties Length: 255aa    MW: 28517.7 Da    PI: 8.4974
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004493506.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2130.00032198220223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     kCp C+  Fs+  +L+ H ++ H
  XP_004493506.1 198 KCPQCSAKFSSVTSLVDHVKKvH 220
                     7*******************999 PP
2zf-C2H214.88.2e-05230251323
                     ETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   3 CpdCgksFsrksnLkrHirt.H 23 
                     Cp+C+k F ++ +L++H  + H
  XP_004493506.1 230 CPKCSKGFLDPASLVKHVDRdH 251
                     *****************99888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1183101.15E-11651No hitNo description
Gene3DG3DSA:4.10.1110.109.9E-101052IPR000058Zinc finger, AN1-type
PROSITE profilePS510397.4971059IPR000058Zinc finger, AN1-type
PfamPF014288.4E-121351IPR000058Zinc finger, AN1-type
SMARTSM001540.00751352IPR000058Zinc finger, AN1-type
Gene3DG3DSA:4.10.1110.102.5E-1091149IPR000058Zinc finger, AN1-type
SuperFamilySSF1183108.44E-993145No hitNo description
PROSITE profilePS510397.71198147IPR000058Zinc finger, AN1-type
PfamPF014284.9E-8101141IPR000058Zinc finger, AN1-type
SMARTSM001540.54101142IPR000058Zinc finger, AN1-type
PROSITE profilePS501579.93197225IPR007087Zinc finger, C2H2
SMARTSM003550.0081197220IPR015880Zinc finger, C2H2-like
PfamPF138941.3E-4198220No hitNo description
SuperFamilySSF576671.31E-5198247No hitNo description
PROSITE patternPS000280199220IPR007087Zinc finger, C2H2
PROSITE profilePS501579.494228255IPR007087Zinc finger, C2H2
SMARTSM003552.7228251IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280230251IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MGTPEFPDLG KHCAVSHCRL IDFLPFTCDR CNQVYCLEHR SYIKHHCTKP NKNDITVVIC  60
PLCAKGVRLI PDKDPNIVWE NHVNTDCDPS NYDKVTKKKK CPAPGCRETL VFSNTIKCRD  120
CEVEHCLKHR FGADHKCSGP KKLETSFSFM SSLLNNRSNS KEDSKPNSSK WTSSLIDLAS  180
KLGGEINQAW QSFQVEEKCP QCSAKFSSVT SLVDHVKKVH QVKKVPISAC PKCSKGFLDP  240
ASLVKHVDRD HGGSS
Functional Description ? help Back to Top
Source Description
UniProtMay be involved in environmental stress response. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004493506.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004493506.10.0zinc finger AN1 and C2H2 domain-containing stress-associated protein 11
RefseqXP_012569287.10.0zinc finger AN1 and C2H2 domain-containing stress-associated protein 11
SwissprotQ8VZ421e-104SAP11_ARATH; Zinc finger AN1 and C2H2 domain-containing stress-associated protein 11
TrEMBLA0A1S3E0J70.0A0A1S3E0J7_CICAR; zinc finger AN1 and C2H2 domain-containing stress-associated protein 11
STRINGXP_004493506.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF58643351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57480.11e-101C2H2 family protein