PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004493401.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bZIP
Protein Properties Length: 458aa    MW: 50956.1 Da    PI: 8.4314
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004493401.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.11.1e-09171213345
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                     + k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  XP_004493401.1 171 DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 213
                     568899************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.0E-8164216No hitNo description
SMARTSM003381.4E-8169232IPR004827Basic-leucine zipper domain
PfamPF077166.6E-7169215IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415171215IPR004827Basic-leucine zipper domain
CDDcd147085.70E-22173225No hitNo description
SuperFamilySSF579596.88E-7173216No hitNo description
PROSITE patternPS000360176191IPR004827Basic-leucine zipper domain
PfamPF141443.6E-30256330IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 458 aa     Download sequence    Send to blast
MGSRRRIVNV SSENTDKVVN GMPSYAPPLP PNSMGMEGTN IHPSRISEFG ALEQSLGFRV  60
EDAMNLSRNP VFNQMKSNSQ ALGADIQFGA LSKSIANSDI NLSAAIAGSQ TLQLQRDSQP  120
NLASTSGGHR ENWGESNMAD GSPDTSTDDT EDKNRMLERG DSSERSKDKS DQKTLRRLAQ  180
NREAARKSRL RKKAYVQQLE SSRLKLTQLE QELQRARQQG IFISSTGEQT HSMSGNGAMA  240
FDVEYARWLE EHNRQTNELR AAINSHAGDI ELRTIVDNFM TQFEDIYRLK GIAAKADVFH  300
ILSGMWKTPA ERCFMWIGGF RSSELLKLLV SHLEPLTEQQ LMGIYNLQQS SQQAEDALSQ  360
GMDALQQSLS ETLANGSPNP SNSSGNVANY MGQMAMAMGK LGTLEGFLRQ ADNLRQQTLQ  420
QMLRILTTRQ SARALLAISD YFSRLRALSS LWLARPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004493401.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1395140.0BT139514.1 Medicago truncatula clone JCVI-FLMt-18J5 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004493401.10.0transcription factor TGA2.3-like
RefseqXP_012569330.10.0transcription factor TGA2.3-like
SwissprotO241600.0TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A1S2XRI50.0A0A1S2XRI5_CICAR; transcription factor TGA2.3-like
STRINGXP_004493401.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14703494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-146TGACG motif-binding factor 6