PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_004493288.1

Organism

Cicer arietinum

Taxonomic ID

3827

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer

Family

bZIP

Protein Properties

Length: 309aa MW: 34482.7 Da PI: 7.3232

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_004493288.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	52	1.5e-16	239	285	5	52
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 +r++r++kNRe+A rsR+RK+a+++eLe kv Le+eN++Lk +l e+ XP_004493288.1 239 RRQKRMIKNRESAARSRARKQAYTQELEIKVSRLEEENERLK-RLHEI 285 79*************************************999.55555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	3.2E-14	232	281	No hit	No description
SMART	SM00338	5.2E-15	235	303	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.323	237	281	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	5.5E-13	239	281	IPR004827	Basic-leucine zipper domain
CDD	cd14707	1.46E-24	239	284	No hit	No description
SuperFamily	SSF57959	6.88E-11	239	283	No hit	No description
PROSITE pattern	PS00036	0	242	257	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence Send to blast
MGSHGGAIQE PKTGPLAREG SLYNLTLDEV QNQLGNLGKP LGSMNLDELL KSLWTSEAAQ 60 ASGLDSGTND AYMQLASVSS MNPLTLSGDL SKKTIDEVWR DMQQKKSITQ DRRTPTLGEM 120 TLEDFLMKAG VATESFPNED NAISGGVDSQ QHGQWMQYQM PSMQQQQQQQ QHRHHQNSMM 180 PGFTGFMTGH VVQQPITVAV NPVLDAGYSE VMATTSSDTQ TPGRKRDASG NVVEKTVERR 240 QKRMIKNRES AARSRARKQA YTQELEIKVS RLEEENERLK RLHEIERVLP SMPPPDPKHQ 300 LRRTSSAPL

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_004493288.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AC149134	1e-142	AC149134.2 Medicago truncatula clone mth2-19l15, complete sequence.
GenBank	AC203550	1e-142	AC203550.5 Medicago truncatula clone mth2-145m13, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004493288.1	0.0	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	1e-96	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A1S2XR91	0.0	A0A1S2XR91_CICAR; ABSCISIC ACID-INSENSITIVE 5-like protein 2
STRING	XP_004493288.1	0.0	(Cicer arietinum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1320	34	105

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	1e-83	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]