PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004493287.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family G2-like
Protein Properties Length: 225aa    MW: 25042.9 Da    PI: 4.9051
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004493287.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like50.25.6e-1618462755
         G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRl 55
                    AtPk +l++m+v+gLt++hvkSHLQkYRl
  XP_004493287.1 18 ATPKGVLRVMGVPGLTIYHVKSHLQKYRL 46
                    9***************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
TIGRFAMsTIGR015574.1E-111847IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.604.1E-151847IPR009057Homeodomain-like
SuperFamilySSF466892.69E-61846IPR009057Homeodomain-like
PfamPF143794.7E-2481126IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    Send to blast
MTVLWMPLHN LVDQIVGATP KGVLRVMGVP GLTIYHVKSH LQKYRLAKYL PESPADGKDS  60
KDEKRNSGDS NSGAESSPGL QINDALRMQM EVQKRLHEQL EVQKQLQMRI EAQGKYLQKI  120
IEEQQKLGST LTASETFPLP HEKQNHPQSE PSGSSDALAD TFSPLKKQRI DEGSKDGFDA  180
SQVPRKTAQK NDCNVGLMDP NLYGDDAGLG FDLETENEED NESEQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004493287.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ0073111e-166HQ007311.1 Glycine max cultivar Jidou11 MYB transcription factor (PHR1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004493287.11e-167myb family transcription factor PHL7-like isoform X3
RefseqXP_027188398.11e-167myb family transcription factor PHL7-like isoform X3
SwissprotQ9SJW06e-51PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A1S2XTB01e-165A0A1S2XTB0_CICAR; myb family transcription factor PHL7-like isoform X3
STRINGXP_004493285.11e-150(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.16e-53G2-like family protein