PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004492035.2
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 200aa    MW: 22455.8 Da    PI: 9.0255
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004492035.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.41.2e-204797155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    ++y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+ ae+Aa a+++a++k++g
  XP_004492035.2 47 PHYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDNAEDAAIAYDKAALKFKG 97
                    68********.**********94....45************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.85E-3447105No hitNo description
PfamPF008474.7E-134797IPR001471AP2/ERF domain
SMARTSM003801.4E-3648111IPR001471AP2/ERF domain
PROSITE profilePS5103224.32948105IPR001471AP2/ERF domain
SuperFamilySSF541711.37E-2248106IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.1E-3248106IPR001471AP2/ERF domain
PRINTSPR003675.2E-144960IPR001471AP2/ERF domain
PRINTSPR003675.2E-1487107IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009723Biological Processresponse to ethylene
GO:0009737Biological Processresponse to abscisic acid
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071497Biological Processcellular response to freezing
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    Send to blast
MVSALSQVMG TSTNKNNPHM TQSIATSTNM VKEEPQPLLD QESTKKPHYR GVRQRPWGKW  60
AAEIRDPKKA ARVWLGTFDN AEDAAIAYDK AALKFKGTKA KLNFPQRIVQ CNNNSNMLQQ  120
QQGSYSNNFN MLQQQGSYNT STSATNSSIQ QSGCVSNDQQ VFPNLFQYAQ ILSSDAEFPY  180
YASNLFNQQQ QQGDDHHPPS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-2848108263ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004492035.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1385682e-95BT138568.1 Medicago truncatula clone JCVI-FLMt-11K6 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004492035.21e-149ethylene-responsive transcription factor ERF113
TrEMBLA0A1S2XQK81e-147A0A1S2XQK8_CICAR; ethylene-responsive transcription factor ERF113
STRINGXP_004492035.11e-148(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF98534115
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.15e-35related to AP2 6l