PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004491945.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 333aa    MW: 37260.8 Da    PI: 4.8044
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004491945.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH56.26.1e-1854103255
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r +h+e E+rRR++iN++f+ Lr+l+P++    ++K +Ka+ L +++eYI+ Lq
  XP_004491945.1  54 RSKHSETEQRRRSKINERFQVLRDLIPQN----DQKRDKASFLLEVIEYIQFLQ 103
                     899*************************9....9*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.102.8E-2450126IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-2052131IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.29552102IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.5E-1554103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.98E-1654107No hitNo description
SMARTSM003532.3E-1358108IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    Send to blast
MARSAKGNRD EDLVDDDDEQ DLFTSNTSSS LNINNNNAVK GDEPSRGKRA NTHRSKHSET  60
EQRRRSKINE RFQVLRDLIP QNDQKRDKAS FLLEVIEYIQ FLQEKLQIYE QSYEGWNQEP  120
TKLTPWRNHH GPADNTTDPS RAIQNGSVRE KNNNVSPSLP KNIQNSIDSD LSTTIEKGHT  180
LGLAGEAVPM TMQMRLDMFD PVVSSGIVSQ QMPELPLSNA DKDDYIVADN TLKEQEELTS  240
ESGSDSISNA YSQRILGTLT QTLQSSGVDL SQASVSVQVD VGRRTDTRLT SSPYGSKGHE  300
NPFASDRAMA CSGIDYFSED SELSPKRFRR EAS
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004491945.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311271e-151KT031127.1 Glycine max clone HN_CCL_217 bHLH transcription factor (Glyma18g51080.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004491945.10.0transcription factor BIM2-like isoform X1
TrEMBLA0A1S2XPI70.0A0A1S2XPI7_CICAR; transcription factor BIM2-like isoform X1
STRINGXP_004491945.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17303382
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.12e-61BES1-interacting Myc-like protein 2