PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_004489632.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family | bZIP | ||||||||
Protein Properties | Length: 306aa MW: 34226.2 Da PI: 8.4837 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 45.1 | 2.2e-14 | 236 | 284 | 5 | 54 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 +r++r++kNRe+A rsR+R++a+++eLe kv Le+eN++L+ ++e+ +k XP_004489632.1 236 RRQKRMIKNRESAARSRARRQAYTQELELKVSRLEEENERLRRQNEM-EK 284 79****************************************66654.44 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.4E-14 | 230 | 285 | No hit | No description |
SMART | SM00338 | 3.9E-14 | 232 | 300 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.576 | 234 | 279 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.0E-11 | 236 | 282 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.19E-11 | 236 | 286 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 239 | 254 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 306 aa Download sequence Send to blast |
MGSQNGVVQE SKTSPLSRSG SLYNLTLDEV QNQLGNLGKP LGSMNLDELL KSVWSVEAAE 60 ASDFDANNMQ HNQLGSLNSQ GSLTLSGDLS KKTVDEVWKD MQVKKRSVNR DRKVQERVPT 120 LGEMTLEDFL VKAGVVGESF HNNKEGVDNS NGDSHSQQNV SQHGHWMQYH QLASVQQHDN 180 HQNNMMGGFV TFQVAGNQVL DAALSPSSLI GTLSDTQTLG RKRVASGIVV EKTVERRQKR 240 MIKNRESAAR SRARRQAYTQ ELELKVSRLE EENERLRRQN EMEKEVLCVP PPEPKNQLRR 300 TSSASF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00409 | DAP | Transfer from AT3G56850 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_004489632.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004489632.1 | 0.0 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
Swissprot | Q9LES3 | 1e-110 | AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | A0A1S2XKH9 | 0.0 | A0A1S2XKH9_CICAR; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
STRING | XP_004489632.1 | 0.0 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1320 | 34 | 105 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56850.1 | 1e-91 | ABA-responsive element binding protein 3 |
Publications ? help Back to Top | |||
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