PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_004489061.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family | bZIP | ||||||||
Protein Properties | Length: 345aa MW: 38218.1 Da PI: 6.3203 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.5 | 4.4e-11 | 204 | 249 | 5 | 50 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 kr +r NR +A+rsR RK+++i eLe+ v +L++e +aL ++ XP_004489061.1 204 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSALSPRVA 249 8999*********************************999987765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.7E-14 | 200 | 264 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.726 | 202 | 254 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.8E-13 | 204 | 255 | No hit | No description |
Pfam | PF00170 | 1.3E-9 | 204 | 249 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.27E-11 | 204 | 258 | No hit | No description |
CDD | cd14703 | 1.42E-22 | 205 | 255 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 207 | 222 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 345 aa Download sequence Send to blast |
MAQLPPKIPT IPQNWPYFPH QRVSSTTMSN ITSTTTTTTT NTHHDDNQSS WIDEFLDFSS 60 ARRGSHRRSA SDSIAFLETS FLEEDCRSGG AGGGGGGGFD GLDDDQLISM FSDNVPGVVS 120 FMPPPMSSTS NPSSPSSDQN SNNNEEKPMA MVLDSSPSQE HYHHEVKPKD EAVEDESSCK 180 IEAEAAQPSS AATITCTETV VDPKRVKRIL ANRQSAQRSR VRKLQYISEL ERSVTSLQTE 240 VSALSPRVAF LDHQRLILNV DNSALKQRIA ALAQDKLFKD AHQEALKKEI ERLRQIYHQQ 300 SIHKMGNSNN NNGPSLQSTQ TSQPQQQNSN FHQHLGCKDK EQLLS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator. {ECO:0000269|PubMed:17719007}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_004489061.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015040 | 3e-31 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004489061.1 | 0.0 | basic leucine zipper 34-like | ||||
Swissprot | Q9M2K4 | 4e-94 | BZP61_ARATH; Basic leucine zipper 61 | ||||
TrEMBL | A0A1S2XGM1 | 0.0 | A0A1S2XGM1_CICAR; basic leucine zipper 34-like | ||||
STRING | XP_004489061.1 | 0.0 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2011 | 34 | 88 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42380.2 | 9e-72 | bZIP family protein |
Publications ? help Back to Top | |||
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