PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004489004.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family BES1
Protein Properties Length: 325aa    MW: 34955.9 Da    PI: 8.1512
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004489004.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822214.82e-6621441149
          DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 
                     ++++r+ptwkErEnnkrRERrRRaiaaki++GLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp e++++ag sa a+p+ss++
  XP_004489004.1   2 TSGTRQPTWKERENNKRRERRRRAIAAKIFSGLRMYGNYKLPKHCDNNEVLKALCNEAGWIVEPDGTTYRKGCKPIERMDVAGGSAMATPCSSYH 96 
                     5899******************************************************************************************* PP

          DUF822  96 sslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsss 149
                             +sp++sy++sp sssfpsp s++++ + +   +sl+p+l++ls+ sss
  XP_004489004.1  97 --------PSPCASYNPSPGSSSFPSPRSSSHAVNPNGdgNSLIPWLKNLSSGSSS 144
                     ........*******************9988876665567**********996665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.3E-653139IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MTSGTRQPTW KERENNKRRE RRRRAIAAKI FSGLRMYGNY KLPKHCDNNE VLKALCNEAG  60
WIVEPDGTTY RKGCKPIERM DVAGGSAMAT PCSSYHPSPC ASYNPSPGSS SFPSPRSSSH  120
AVNPNGDGNS LIPWLKNLSS GSSSTSSSKL PQLYIHTGSI SAPVTPPLSS PTARSSQTKA  180
DWEVRSARPG WGGQQYPFLP SSTPPSPGRQ VLDPDWFAGI RMPQGGPTSP TFSLVASNPF  240
GFREEVFCGS DSRMWTPGQS GTCSPAVAAG SDHTADIPMA EAVSDEFAFG SHTAGLVKPW  300
EGERIHEDCD GSDDLELTLG CSKTR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A5e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B5e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C5e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D5e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004489004.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2076010.0AC207601.5 Medicago truncatula chromosome 2 BAC clone mth2-45c5, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004489004.10.0BES1/BZR1 homolog protein 4-like
SwissprotQ9ZV881e-133BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A1S2XGH40.0A0A1S2XGH4_CICAR; BES1/BZR1 homolog protein 4-like
STRINGXP_004489003.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26613375
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-121BES1/BZR1 homolog 4