PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004489001.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family BES1
Protein Properties Length: 321aa    MW: 34887.9 Da    PI: 8.1492
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004489001.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822210.83.6e-6541433148
          DUF822   3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqss 97 
                     ++r ptwkErEnnk+RERrRRaiaaki++GLR++Gn++lpk++DnneVlkALc+eAGw+ve+DGttyrkg+kple+++++g s+ asp+ss++  
  XP_004489001.1   4 GTRLPTWKERENNKKRERRRRAIAAKIFSGLRMYGNFRLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPLEHMDIVGGSSAASPCSSYH-- 96 
                     6899*****************************************************************************************.. PP

          DUF822  98 lkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvss 148
                           +sp++sy++sp sssfpspss+  +++++   +sl+p+l++ls++ss
  XP_004489001.1  97 ------QSPCASYNPSPVSSSFPSPSSSPYTTNHNVdgNSLIPWLKNLSTASS 143
                     ......*******************9988776665466*********988665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056873.4E-654139IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    Send to blast
MTLGTRLPTW KERENNKKRE RRRRAIAAKI FSGLRMYGNF RLPKHCDNNE VLKALCNEAG  60
WTVEPDGTTY RKGCKPLEHM DIVGGSSAAS PCSSYHQSPC ASYNPSPVSS SFPSPSSSPY  120
TTNHNVDGNS LIPWLKNLST ASSPKLPHPY LHSGSISAPV TPPLSSPTAR TPRMNSDWDD  180
RSARPGWTGQ HYSFLPSSGP PSPGRQIVDP EWFAGIKLPH TSPTSPTFNL VSPNPFAFKE  240
DGFSGSGSRM WTPGPSGTCS PAIAAGSDHN ADIPMSEAAI SDEFAFGSNT FGIVKPWEGE  300
RIHEEFVADD LELTLGNSKT R
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A3e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B3e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C3e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D3e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00248DAPTransfer from AT1G78700Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004489001.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2076011e-170AC207601.5 Medicago truncatula chromosome 2 BAC clone mth2-45c5, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004489001.10.0BES1/BZR1 homolog protein 4-like isoform X1
RefseqXP_004489002.10.0BES1/BZR1 homolog protein 4-like isoform X2
SwissprotQ9ZV881e-129BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A1S2XJ520.0A0A1S2XJ52_CICAR; BES1/BZR1 homolog protein 4-like isoform X1
STRINGXP_004489001.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26613375
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-120BES1/BZR1 homolog 4